Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12090

Experiment: m.b. Nalidixic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.016 mg/ml
1,256,261	+		PGA1_c12080	0.49	+1.9
1,256,263	-		PGA1_c12080	0.49	-0.5
1,256,263	-		PGA1_c12080	0.49	-0.2
1,256,275	-		PGA1_c12080	0.49	-0.8
1,256,338	-		PGA1_c12080	0.53	-1.0
1,256,342	+		PGA1_c12080	0.53	+0.8
1,256,386	+		PGA1_c12080	0.56	+0.2
1,256,386	+		PGA1_c12080	0.56	-0.4
1,256,504	+		PGA1_c12080	0.62	-0.6
1,256,550	+		PGA1_c12080	0.65	-3.3
1,256,569	+		PGA1_c12080	0.66	+0.8
1,256,577	-		PGA1_c12080	0.66	-0.7
1,256,639	+		PGA1_c12080	0.70	-0.2
1,256,669	-		PGA1_c12080	0.72	-1.0
1,256,688	+		PGA1_c12080	0.73	+0.5
1,256,696	-		PGA1_c12080	0.73	-1.4
1,256,700	-		PGA1_c12080	0.73	-0.3
1,256,720	+		PGA1_c12080	0.74	-0.4
1,256,728	-		PGA1_c12080	0.75	-0.4
1,256,743	-		PGA1_c12080	0.76	-0.6
1,256,796	-		PGA1_c12080	0.79	+0.2
1,256,806	+		PGA1_c12080	0.79	-0.0
1,256,812	+		PGA1_c12080	0.80	-0.6
1,256,812	+		PGA1_c12080	0.80	-0.3
1,256,872	-		PGA1_c12080	0.83	-0.5
1,256,884	-		PGA1_c12080	0.84	+0.4
1,256,886	+		PGA1_c12080	0.84	-0.4
1,256,886	+		PGA1_c12080	0.84	-0.1
1,256,886	+		PGA1_c12080	0.84	-0.5
1,256,894	-		PGA1_c12080	0.84	-2.0
1,256,894	-		PGA1_c12080	0.84	-0.6
1,256,894	-		PGA1_c12080	0.84	-0.2
1,256,894	-		PGA1_c12080	0.84	+0.9
1,256,896	+		PGA1_c12080	0.84	+0.1
1,256,899	-		PGA1_c12080	0.85	-1.0
1,256,904	-		PGA1_c12080	0.85	-0.7
1,256,904	-		PGA1_c12080	0.85	-0.4
1,256,928	+		PGA1_c12080	0.86	-2.0
1,256,947	-		PGA1_c12080	0.87	-0.4
1,256,956	+		PGA1_c12080	0.88	+0.2
1,256,964	-		PGA1_c12080	0.88	-0.2
1,256,995	-		PGA1_c12080	0.90	-1.2
1,256,997	+				-0.9
1,256,999	+				-0.7
1,257,005	+				-1.2
1,257,005	-				-1.4
1,257,122	+				-1.2
1,257,146	+				-0.1
1,257,191	+				-1.0
1,257,199	-				-1.7
1,257,199	-				-0.7
1,257,199	-				-0.8
1,257,205	+				-1.0
1,257,205	+				+0.5
1,257,253	+				+0.1
1,257,253	+				+0.0
1,257,256	+				+0.4
1,257,261	-				-0.2
1,257,266	-				-1.2
1,257,305	+		PGA1_c12090	0.12	-0.9
1,257,311	-		PGA1_c12090	0.14	-2.1
1,257,313	-		PGA1_c12090	0.14	-0.5
1,257,346	-		PGA1_c12090	0.22	-1.0
1,257,428	+		PGA1_c12090	0.43	+0.6
1,257,492	-		PGA1_c12090	0.59	-0.6
1,257,541	+		PGA1_c12090	0.71	-1.1
1,257,549	-		PGA1_c12090	0.73	-0.1
1,257,611	-		PGA1_c12090	0.88	-0.1
1,257,664	+				+0.3
1,257,672	+				-0.7
1,257,672	-				-1.0
1,257,672	-				+1.9
1,257,677	+				-1.0
1,257,684	+				-0.2
1,257,684	+				-0.2
1,257,684	+				-0.2
1,257,684	+				-0.8
1,257,684	+				-0.3
1,257,684	+				-0.2
1,257,684	+				-0.6
1,257,684	+				+0.5
1,257,685	-				-1.0
1,257,689	+				-0.3
1,257,692	-				+0.5
1,257,692	-				+0.6
1,257,692	-				+0.2
1,257,692	-				-0.8
1,257,692	-				-0.2
1,257,692	-				-0.2
1,257,692	-				+1.0
1,257,692	-				+0.5
1,257,692	-				+0.2
1,257,692	-				+0.1
1,257,692	-				+0.2
1,257,748	-				+0.7
1,257,777	-				-0.3
1,257,783	+				-1.3
1,257,793	+				+0.2
1,257,801	-				+1.1
1,257,801	-				-0.1
1,257,801	-				-0.7
1,257,801	-				-0.6
1,257,801	-				-2.2
1,257,801	-				-0.2
1,257,801	-				-0.4
1,257,817	+				-0.8
1,257,817	+				+0.8
1,257,817	+				-1.1
1,257,825	-				+0.9
1,257,825	-				+0.2
1,257,835	-				-0.2
1,257,968	-				-0.0
1,257,968	-				+0.1
1,257,972	-				+0.1
1,258,016	+				-0.3
1,258,027	-				-0.2
1,258,039	-				+0.1
1,258,048	+				+1.5
1,258,048	+				+0.0
1,258,049	+				-1.2
1,258,056	-				-2.3
1,258,059	+				-1.5
1,258,237	-		PGA1_c12100	0.55	+0.2
1,258,316	-		PGA1_c12100	0.76	-0.4
1,258,327	+		PGA1_c12100	0.79	+0.0
1,258,335	-		PGA1_c12100	0.81	-0.9
1,258,335	-		PGA1_c12100	0.81	+0.3
1,258,342	-		PGA1_c12100	0.83	-1.0
1,258,344	-		PGA1_c12100	0.84	+0.1
1,258,359	-		PGA1_c12100	0.88	-0.1
1,258,416	+				-1.2
1,258,437	-				+0.3
1,258,448	+				+0.3
1,258,456	+				+0.2
1,258,462	+				-0.9
1,258,479	+				-0.2
1,258,479	+				+0.2
1,258,479	+				-1.6
1,258,479	+				-1.2
1,258,479	+				+0.6
1,258,479	+				-0.4
1,258,479	+				+1.4
1,258,479	+				-0.8
1,258,479	+				+1.0
1,258,479	+				-1.1
1,258,487	-				-0.2
1,258,487	-				+0.3
1,258,488	-				-0.2
1,258,535	-				+1.5
1,258,574	+		PGA1_c12110	0.12	+0.3
1,258,593	-		PGA1_c12110	0.17	+0.8
1,258,594	-		PGA1_c12110	0.17	+0.1
1,258,632	+		PGA1_c12110	0.26	+1.2