Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04949 and H281DRAFT_04950 are separated by 285 nucleotides H281DRAFT_04950 and H281DRAFT_04951 are separated by 60 nucleotides
H281DRAFT_04949: H281DRAFT_04949 - putative spermidine/putrescine transport system permease protein, at 133,872 to 134,699
_04949
H281DRAFT_04950: H281DRAFT_04950 - tRNA_Ser_GGA, at 134,985 to 135,075
_04950
H281DRAFT_04951: H281DRAFT_04951 - cation/acetate symporter, at 135,136 to 137,154
_04951
Position (kb) 134
135
136 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 134.648 kb on + strand at 134.651 kb on + strand at 134.652 kb on - strand at 134.652 kb on - strand at 134.652 kb on - strand at 134.682 kb on - strand at 134.682 kb on - strand at 134.706 kb on - strand at 134.706 kb on - strand at 134.706 kb on - strand at 134.724 kb on + strand at 134.724 kb on + strand at 134.918 kb on - strand at 134.918 kb on - strand at 135.138 kb on - strand at 135.152 kb on + strand at 135.152 kb on + strand at 135.152 kb on + strand at 135.153 kb on - strand at 135.171 kb on + strand at 135.172 kb on - strand at 135.172 kb on - strand at 135.203 kb on - strand at 135.329 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.332 kb on + strand at 135.497 kb on + strand, within H281DRAFT_04951 at 135.497 kb on + strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.585 kb on - strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.587 kb on + strand, within H281DRAFT_04951 at 135.918 kb on - strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.989 kb on + strand, within H281DRAFT_04951 at 135.990 kb on - strand, within H281DRAFT_04951 at 136.002 kb on + strand, within H281DRAFT_04951 at 136.039 kb on + strand, within H281DRAFT_04951 at 136.040 kb on - strand, within H281DRAFT_04951
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 134,648 + +0.1 134,651 + -0.5 134,652 - -1.1 134,652 - -0.1 134,652 - -0.4 134,682 - -0.6 134,682 - +0.2 134,706 - -0.2 134,706 - +0.7 134,706 - +0.0 134,724 + -1.2 134,724 + -0.3 134,918 - +1.5 134,918 - +0.0 135,138 - +0.6 135,152 + -0.8 135,152 + -1.0 135,152 + -0.9 135,153 - -0.5 135,171 + +0.5 135,172 - -0.7 135,172 - -0.8 135,203 - -1.7 135,329 + -2.4 135,332 + -0.2 135,332 + -2.2 135,332 + -2.0 135,332 + -0.5 135,497 + H281DRAFT_04951 0.18 -1.4 135,497 + H281DRAFT_04951 0.18 -0.7 135,585 - H281DRAFT_04951 0.22 -0.1 135,585 - H281DRAFT_04951 0.22 -1.9 135,585 - H281DRAFT_04951 0.22 -0.4 135,587 + H281DRAFT_04951 0.22 -2.5 135,587 + H281DRAFT_04951 0.22 -1.4 135,587 + H281DRAFT_04951 0.22 -2.3 135,587 + H281DRAFT_04951 0.22 -3.6 135,918 - H281DRAFT_04951 0.39 -3.2 135,989 + H281DRAFT_04951 0.42 -0.8 135,989 + H281DRAFT_04951 0.42 -2.5 135,989 + H281DRAFT_04951 0.42 -1.0 135,989 + H281DRAFT_04951 0.42 -1.3 135,990 - H281DRAFT_04951 0.42 -1.9 136,002 + H281DRAFT_04951 0.43 -1.7 136,039 + H281DRAFT_04951 0.45 +0.5 136,040 - H281DRAFT_04951 0.45 -0.2
Or see this region's nucleotide sequence