Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03717

Experiment: Malonic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03716 and H281DRAFT_03717 are separated by 126 nucleotidesH281DRAFT_03717 and H281DRAFT_03718 are separated by 204 nucleotidesH281DRAFT_03718 and H281DRAFT_03719 are separated by 2 nucleotides H281DRAFT_03716: H281DRAFT_03716 - AraC family transcriptional regulator, transcriptional activator FtrA, at 231,364 to 232,392 _03716 H281DRAFT_03717: H281DRAFT_03717 - Rhodanese-related sulfurtransferase, at 232,519 to 232,929 _03717 H281DRAFT_03718: H281DRAFT_03718 - hypothetical protein, at 233,134 to 233,292 _03718 H281DRAFT_03719: H281DRAFT_03719 - Zn-dependent hydrolases, including glyoxylases, at 233,295 to 234,227 _03719 Position (kb) 232 233Strain fitness (log2 ratio) -1 0 1at 231.948 kb on - strand, within H281DRAFT_03716at 231.948 kb on - strand, within H281DRAFT_03716at 232.519 kb on - strandat 232.862 kb on + strand, within H281DRAFT_03717at 233.872 kb on + strand, within H281DRAFT_03719

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Per-strain Table

Position Strand Gene LocusTag Fraction Malonic (C)
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231,948 - H281DRAFT_03716 0.57 -0.2
231,948 - H281DRAFT_03716 0.57 +0.4
232,519 - -0.7
232,862 + H281DRAFT_03717 0.83 +0.7
233,872 + H281DRAFT_03719 0.62 -0.1

Or see this region's nucleotide sequence