Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02771 and H281DRAFT_02772 overlap by 4 nucleotides H281DRAFT_02772 and H281DRAFT_02773 are separated by 130 nucleotides H281DRAFT_02773 and H281DRAFT_02774 are separated by 46 nucleotides
H281DRAFT_02771: H281DRAFT_02771 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase, at 358,469 to 360,685
_02771
H281DRAFT_02772: H281DRAFT_02772 - Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family, at 360,682 to 361,458
_02772
H281DRAFT_02773: H281DRAFT_02773 - hypothetical protein, at 361,589 to 361,897
_02773
H281DRAFT_02774: H281DRAFT_02774 - replication region DNA-binding N-term, at 361,944 to 364,175
_02774
Position (kb) 360
361
362 Strain fitness (log2 ratio) -1
0
1 at 359.892 kb on + strand, within H281DRAFT_02771 at 360.191 kb on + strand, within H281DRAFT_02771 at 360.191 kb on + strand, within H281DRAFT_02771 at 360.192 kb on - strand, within H281DRAFT_02771 at 360.702 kb on + strand at 360.796 kb on + strand, within H281DRAFT_02772 at 360.796 kb on + strand, within H281DRAFT_02772 at 360.870 kb on + strand, within H281DRAFT_02772 at 360.870 kb on + strand, within H281DRAFT_02772 at 361.104 kb on - strand, within H281DRAFT_02772 at 361.104 kb on - strand, within H281DRAFT_02772 at 361.104 kb on - strand, within H281DRAFT_02772 at 361.895 kb on + strand at 361.896 kb on - strand at 361.896 kb on - strand at 362.106 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 359,892 + H281DRAFT_02771 0.64 +0.8 360,191 + H281DRAFT_02771 0.78 +0.7 360,191 + H281DRAFT_02771 0.78 +0.3 360,192 - H281DRAFT_02771 0.78 +0.0 360,702 + +0.1 360,796 + H281DRAFT_02772 0.15 +0.3 360,796 + H281DRAFT_02772 0.15 +0.6 360,870 + H281DRAFT_02772 0.24 +1.2 360,870 + H281DRAFT_02772 0.24 +0.7 361,104 - H281DRAFT_02772 0.54 +0.6 361,104 - H281DRAFT_02772 0.54 +0.7 361,104 - H281DRAFT_02772 0.54 +0.9 361,895 + -0.5 361,896 - +1.3 361,896 - +0.9 362,106 + -0.6
Or see this region's nucleotide sequence