Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02716 and H281DRAFT_02717 are separated by 138 nucleotides H281DRAFT_02717 and H281DRAFT_02718 are separated by 119 nucleotides H281DRAFT_02718 and H281DRAFT_02719 are separated by 137 nucleotides
H281DRAFT_02716: H281DRAFT_02716 - putative transposase, at 300,321 to 301,037
_02716
H281DRAFT_02717: H281DRAFT_02717 - hypothetical protein, at 301,176 to 301,478
_02717
H281DRAFT_02718: H281DRAFT_02718 - Glycine/D-amino acid oxidase (deaminating), at 301,598 to 302,998
_02718
H281DRAFT_02719: H281DRAFT_02719 - MFS transporter, AAHS family, cis,cis-muconate transporter, at 303,136 to 304,446
_02719
Position (kb) 301
302
303 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 300.655 kb on - strand, within H281DRAFT_02716 at 300.710 kb on - strand, within H281DRAFT_02716 at 300.771 kb on - strand, within H281DRAFT_02716 at 300.795 kb on + strand, within H281DRAFT_02716 at 301.082 kb on + strand at 301.083 kb on - strand at 301.259 kb on + strand, within H281DRAFT_02717 at 301.259 kb on + strand, within H281DRAFT_02717 at 301.271 kb on - strand, within H281DRAFT_02717 at 301.310 kb on - strand, within H281DRAFT_02717 at 301.348 kb on + strand, within H281DRAFT_02717 at 301.348 kb on + strand, within H281DRAFT_02717 at 301.361 kb on + strand, within H281DRAFT_02717 at 301.563 kb on + strand at 301.706 kb on + strand at 301.724 kb on + strand at 301.928 kb on + strand, within H281DRAFT_02718 at 302.130 kb on + strand, within H281DRAFT_02718 at 302.252 kb on - strand, within H281DRAFT_02718 at 302.672 kb on + strand at 302.899 kb on + strand at 302.984 kb on + strand at 303.028 kb on - strand at 303.039 kb on - strand at 303.164 kb on + strand at 303.277 kb on - strand, within H281DRAFT_02719 at 303.277 kb on - strand, within H281DRAFT_02719 at 303.311 kb on + strand, within H281DRAFT_02719 at 303.311 kb on + strand, within H281DRAFT_02719 at 303.312 kb on - strand, within H281DRAFT_02719 at 303.395 kb on + strand, within H281DRAFT_02719 at 303.396 kb on - strand, within H281DRAFT_02719 at 303.498 kb on - strand, within H281DRAFT_02719 at 303.566 kb on + strand, within H281DRAFT_02719 at 303.566 kb on + strand, within H281DRAFT_02719 at 303.567 kb on - strand, within H281DRAFT_02719 at 303.606 kb on + strand, within H281DRAFT_02719 at 303.627 kb on - strand, within H281DRAFT_02719 at 303.653 kb on + strand, within H281DRAFT_02719 at 303.654 kb on - strand, within H281DRAFT_02719 at 303.654 kb on - strand, within H281DRAFT_02719 at 303.890 kb on + strand, within H281DRAFT_02719 at 303.890 kb on + strand, within H281DRAFT_02719 at 303.891 kb on - strand, within H281DRAFT_02719 at 303.891 kb on - strand, within H281DRAFT_02719 at 303.953 kb on + strand, within H281DRAFT_02719 at 303.954 kb on - strand, within H281DRAFT_02719 at 303.954 kb on - strand, within H281DRAFT_02719
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 300,655 - H281DRAFT_02716 0.47 +0.2 300,710 - H281DRAFT_02716 0.54 +0.2 300,771 - H281DRAFT_02716 0.63 -0.2 300,795 + H281DRAFT_02716 0.66 -1.2 301,082 + -0.5 301,083 - +0.7 301,259 + H281DRAFT_02717 0.27 -0.6 301,259 + H281DRAFT_02717 0.27 +0.9 301,271 - H281DRAFT_02717 0.31 +1.3 301,310 - H281DRAFT_02717 0.44 +0.5 301,348 + H281DRAFT_02717 0.57 +1.0 301,348 + H281DRAFT_02717 0.57 -0.0 301,361 + H281DRAFT_02717 0.61 -0.2 301,563 + +0.0 301,706 + +0.6 301,724 + -0.3 301,928 + H281DRAFT_02718 0.24 +0.9 302,130 + H281DRAFT_02718 0.38 +1.5 302,252 - H281DRAFT_02718 0.47 -0.5 302,672 + +0.3 302,899 + +0.0 302,984 + +0.5 303,028 - +0.0 303,039 - +1.1 303,164 + +0.2 303,277 - H281DRAFT_02719 0.11 -0.2 303,277 - H281DRAFT_02719 0.11 -0.5 303,311 + H281DRAFT_02719 0.13 -0.8 303,311 + H281DRAFT_02719 0.13 +1.1 303,312 - H281DRAFT_02719 0.13 -3.4 303,395 + H281DRAFT_02719 0.20 +0.3 303,396 - H281DRAFT_02719 0.20 +1.3 303,498 - H281DRAFT_02719 0.28 -0.6 303,566 + H281DRAFT_02719 0.33 -0.3 303,566 + H281DRAFT_02719 0.33 -0.0 303,567 - H281DRAFT_02719 0.33 +0.3 303,606 + H281DRAFT_02719 0.36 +1.2 303,627 - H281DRAFT_02719 0.37 +0.0 303,653 + H281DRAFT_02719 0.39 +0.1 303,654 - H281DRAFT_02719 0.40 -0.5 303,654 - H281DRAFT_02719 0.40 +0.7 303,890 + H281DRAFT_02719 0.58 +0.5 303,890 + H281DRAFT_02719 0.58 -0.2 303,891 - H281DRAFT_02719 0.58 +1.3 303,891 - H281DRAFT_02719 0.58 -0.2 303,953 + H281DRAFT_02719 0.62 +0.3 303,954 - H281DRAFT_02719 0.62 -0.3 303,954 - H281DRAFT_02719 0.62 -0.2
Or see this region's nucleotide sequence