Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02289 and H281DRAFT_02290 are separated by 127 nucleotides H281DRAFT_02290 and H281DRAFT_02291 are separated by 18 nucleotides H281DRAFT_02291 and H281DRAFT_02292 are separated by 131 nucleotides
H281DRAFT_02289: H281DRAFT_02289 - Glyoxylase, beta-lactamase superfamily II, at 434,886 to 435,959
_02289
H281DRAFT_02290: H281DRAFT_02290 - Threonine/homoserine/homoserine lactone efflux protein, at 436,087 to 436,674
_02290
H281DRAFT_02291: H281DRAFT_02291 - AraC-type DNA-binding protein, at 436,693 to 437,538
_02291
H281DRAFT_02292: H281DRAFT_02292 - amino acid ABC transporter substrate-binding protein, PAAT family, at 437,670 to 438,464
_02292
Position (kb) 436
437
438 Strain fitness (log2 ratio) -1
0
1
2 at 435.758 kb on + strand, within H281DRAFT_02289 at 435.759 kb on - strand, within H281DRAFT_02289 at 435.759 kb on - strand, within H281DRAFT_02289 at 435.958 kb on - strand at 436.073 kb on + strand at 436.073 kb on + strand at 436.296 kb on + strand, within H281DRAFT_02290 at 436.297 kb on - strand, within H281DRAFT_02290 at 436.333 kb on + strand, within H281DRAFT_02290 at 436.333 kb on + strand, within H281DRAFT_02290 at 436.333 kb on + strand, within H281DRAFT_02290 at 436.333 kb on + strand, within H281DRAFT_02290 at 436.334 kb on - strand, within H281DRAFT_02290 at 436.334 kb on - strand, within H281DRAFT_02290 at 436.409 kb on - strand, within H281DRAFT_02290 at 436.409 kb on - strand, within H281DRAFT_02290 at 436.475 kb on - strand, within H281DRAFT_02290 at 436.537 kb on + strand, within H281DRAFT_02290 at 436.537 kb on + strand, within H281DRAFT_02290 at 436.538 kb on - strand, within H281DRAFT_02290 at 436.541 kb on + strand, within H281DRAFT_02290 at 436.542 kb on - strand, within H281DRAFT_02290 at 436.542 kb on - strand, within H281DRAFT_02290 at 436.542 kb on - strand, within H281DRAFT_02290 at 436.542 kb on - strand, within H281DRAFT_02290 at 436.542 kb on - strand, within H281DRAFT_02290 at 436.546 kb on - strand, within H281DRAFT_02290 at 436.586 kb on - strand, within H281DRAFT_02290 at 436.666 kb on - strand at 436.673 kb on - strand at 436.673 kb on - strand at 436.703 kb on + strand at 436.826 kb on + strand, within H281DRAFT_02291 at 436.851 kb on - strand, within H281DRAFT_02291 at 437.030 kb on - strand, within H281DRAFT_02291 at 437.041 kb on + strand, within H281DRAFT_02291 at 437.042 kb on - strand, within H281DRAFT_02291 at 437.145 kb on + strand, within H281DRAFT_02291 at 437.145 kb on + strand, within H281DRAFT_02291 at 437.145 kb on + strand, within H281DRAFT_02291 at 437.146 kb on - strand, within H281DRAFT_02291 at 437.146 kb on - strand, within H281DRAFT_02291 at 437.358 kb on - strand, within H281DRAFT_02291 at 437.459 kb on + strand at 437.598 kb on + strand at 437.599 kb on - strand at 437.599 kb on - strand at 437.603 kb on + strand at 437.701 kb on + strand at 437.800 kb on + strand, within H281DRAFT_02292 at 437.801 kb on - strand, within H281DRAFT_02292 at 437.951 kb on - strand, within H281DRAFT_02292 at 438.263 kb on + strand, within H281DRAFT_02292 at 438.464 kb on + strand at 438.465 kb on - strand at 438.465 kb on - strand at 438.493 kb on + strand at 438.493 kb on + strand at 438.520 kb on - strand at 438.520 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 435,758 + H281DRAFT_02289 0.81 -0.4 435,759 - H281DRAFT_02289 0.81 +0.4 435,759 - H281DRAFT_02289 0.81 +1.5 435,958 - +0.8 436,073 + -1.2 436,073 + +0.4 436,296 + H281DRAFT_02290 0.36 +0.0 436,297 - H281DRAFT_02290 0.36 +0.4 436,333 + H281DRAFT_02290 0.42 +0.2 436,333 + H281DRAFT_02290 0.42 +0.3 436,333 + H281DRAFT_02290 0.42 -0.2 436,333 + H281DRAFT_02290 0.42 +0.5 436,334 - H281DRAFT_02290 0.42 +0.6 436,334 - H281DRAFT_02290 0.42 +1.2 436,409 - H281DRAFT_02290 0.55 +0.3 436,409 - H281DRAFT_02290 0.55 -1.0 436,475 - H281DRAFT_02290 0.66 +0.8 436,537 + H281DRAFT_02290 0.77 -0.8 436,537 + H281DRAFT_02290 0.77 +0.4 436,538 - H281DRAFT_02290 0.77 -1.0 436,541 + H281DRAFT_02290 0.77 -0.7 436,542 - H281DRAFT_02290 0.77 +0.0 436,542 - H281DRAFT_02290 0.77 -0.4 436,542 - H281DRAFT_02290 0.77 -0.6 436,542 - H281DRAFT_02290 0.77 +1.6 436,542 - H281DRAFT_02290 0.77 +0.1 436,546 - H281DRAFT_02290 0.78 -0.7 436,586 - H281DRAFT_02290 0.85 +0.1 436,666 - -0.4 436,673 - +0.1 436,673 - -0.2 436,703 + -0.2 436,826 + H281DRAFT_02291 0.16 +1.8 436,851 - H281DRAFT_02291 0.19 +0.9 437,030 - H281DRAFT_02291 0.40 +0.0 437,041 + H281DRAFT_02291 0.41 +0.2 437,042 - H281DRAFT_02291 0.41 +0.5 437,145 + H281DRAFT_02291 0.53 +1.0 437,145 + H281DRAFT_02291 0.53 +0.7 437,145 + H281DRAFT_02291 0.53 +0.5 437,146 - H281DRAFT_02291 0.54 +0.4 437,146 - H281DRAFT_02291 0.54 +1.3 437,358 - H281DRAFT_02291 0.79 +0.2 437,459 + +0.5 437,598 + +0.7 437,599 - -0.3 437,599 - +0.9 437,603 + -1.0 437,701 + +0.2 437,800 + H281DRAFT_02292 0.16 +0.6 437,801 - H281DRAFT_02292 0.16 -0.9 437,951 - H281DRAFT_02292 0.35 -0.1 438,263 + H281DRAFT_02292 0.75 -0.6 438,464 + -0.2 438,465 - -0.8 438,465 - +0.6 438,493 + -0.0 438,493 + +0.8 438,520 - +0.3 438,520 - +1.1
Or see this region's nucleotide sequence