Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02133 and H281DRAFT_02134 are separated by 410 nucleotides H281DRAFT_02134 and H281DRAFT_02135 are separated by 192 nucleotides H281DRAFT_02135 and H281DRAFT_02136 are separated by 126 nucleotides
H281DRAFT_02133: H281DRAFT_02133 - hypothetical protein, at 270,471 to 272,057
_02133
H281DRAFT_02134: H281DRAFT_02134 - hypothetical protein, at 272,468 to 273,343
_02134
H281DRAFT_02135: H281DRAFT_02135 - Protein of unknown function (DUF3892), at 273,536 to 273,835
_02135
H281DRAFT_02136: H281DRAFT_02136 - hypothetical protein, at 273,962 to 274,549
_02136
Position (kb) 272
273
274 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 271.509 kb on + strand, within H281DRAFT_02133 at 271.510 kb on - strand, within H281DRAFT_02133 at 271.557 kb on + strand, within H281DRAFT_02133 at 271.558 kb on - strand, within H281DRAFT_02133 at 271.558 kb on - strand, within H281DRAFT_02133 at 271.569 kb on + strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.672 kb on - strand, within H281DRAFT_02133 at 271.691 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.756 kb on + strand, within H281DRAFT_02133 at 271.756 kb on + strand, within H281DRAFT_02133 at 271.757 kb on - strand, within H281DRAFT_02133 at 271.757 kb on - strand, within H281DRAFT_02133 at 271.757 kb on - strand at 271.781 kb on + strand, within H281DRAFT_02133 at 271.781 kb on + strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.785 kb on - strand, within H281DRAFT_02133 at 271.789 kb on + strand, within H281DRAFT_02133 at 271.790 kb on - strand, within H281DRAFT_02133 at 271.844 kb on - strand, within H281DRAFT_02133 at 271.963 kb on + strand at 272.004 kb on + strand at 272.004 kb on + strand at 272.005 kb on - strand at 272.078 kb on - strand at 272.078 kb on - strand at 272.082 kb on + strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.087 kb on + strand at 272.088 kb on - strand at 272.100 kb on + strand at 272.100 kb on + strand at 272.101 kb on - strand at 272.136 kb on + strand at 272.136 kb on + strand at 272.137 kb on - strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.198 kb on + strand at 272.198 kb on + strand at 272.199 kb on - strand at 272.199 kb on - strand at 272.205 kb on - strand at 272.215 kb on + strand at 272.215 kb on + strand at 272.216 kb on - strand at 272.216 kb on - strand at 272.218 kb on - strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.492 kb on - strand at 272.492 kb on - strand at 272.492 kb on - strand at 272.501 kb on - strand at 272.600 kb on + strand, within H281DRAFT_02134 at 272.638 kb on - strand at 272.688 kb on + strand, within H281DRAFT_02134 at 272.688 kb on + strand, within H281DRAFT_02134 at 272.691 kb on + strand, within H281DRAFT_02134 at 272.692 kb on - strand, within H281DRAFT_02134 at 272.692 kb on - strand, within H281DRAFT_02134 at 272.698 kb on + strand, within H281DRAFT_02134 at 272.698 kb on + strand, within H281DRAFT_02134 at 272.701 kb on - strand, within H281DRAFT_02134 at 272.745 kb on + strand, within H281DRAFT_02134 at 272.754 kb on + strand, within H281DRAFT_02134 at 272.810 kb on + strand, within H281DRAFT_02134 at 272.853 kb on + strand, within H281DRAFT_02134 at 272.853 kb on + strand, within H281DRAFT_02134 at 272.854 kb on - strand, within H281DRAFT_02134 at 272.854 kb on - strand, within H281DRAFT_02134 at 272.903 kb on - strand, within H281DRAFT_02134 at 272.992 kb on - strand, within H281DRAFT_02134 at 273.089 kb on + strand, within H281DRAFT_02134 at 273.109 kb on + strand, within H281DRAFT_02134 at 273.110 kb on - strand, within H281DRAFT_02134 at 273.112 kb on - strand, within H281DRAFT_02134 at 273.134 kb on - strand, within H281DRAFT_02134 at 273.134 kb on - strand, within H281DRAFT_02134 at 273.209 kb on + strand, within H281DRAFT_02134 at 273.237 kb on - strand, within H281DRAFT_02134 at 273.252 kb on + strand, within H281DRAFT_02134 at 273.252 kb on + strand, within H281DRAFT_02134 at 273.253 kb on - strand, within H281DRAFT_02134 at 273.322 kb on + strand at 273.344 kb on - strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.358 kb on - strand at 273.358 kb on - strand at 273.430 kb on + strand at 273.453 kb on - strand at 273.453 kb on - strand at 273.453 kb on - strand at 273.459 kb on + strand at 273.459 kb on + strand at 273.503 kb on + strand at 273.619 kb on - strand, within H281DRAFT_02135 at 273.619 kb on - strand, within H281DRAFT_02135 at 273.670 kb on + strand, within H281DRAFT_02135 at 273.687 kb on + strand, within H281DRAFT_02135 at 273.687 kb on + strand, within H281DRAFT_02135 at 273.688 kb on - strand, within H281DRAFT_02135 at 273.736 kb on + strand, within H281DRAFT_02135 at 273.736 kb on + strand, within H281DRAFT_02135 at 273.757 kb on + strand, within H281DRAFT_02135 at 273.805 kb on + strand, within H281DRAFT_02135 at 273.806 kb on - strand at 273.806 kb on - strand at 273.806 kb on - strand at 273.817 kb on + strand at 273.817 kb on + strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.838 kb on + strand at 273.838 kb on + strand at 273.905 kb on + strand at 273.905 kb on + strand at 273.905 kb on + strand at 273.906 kb on - strand at 273.906 kb on - strand at 273.972 kb on + strand at 273.976 kb on - strand at 274.129 kb on + strand at 274.129 kb on + strand, within H281DRAFT_02136 at 274.129 kb on + strand, within H281DRAFT_02136 at 274.190 kb on + strand, within H281DRAFT_02136
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 271,509 + H281DRAFT_02133 0.65 +0.6 271,510 - H281DRAFT_02133 0.65 -1.0 271,557 + H281DRAFT_02133 0.68 -1.6 271,558 - H281DRAFT_02133 0.68 -1.4 271,558 - H281DRAFT_02133 0.68 -2.6 271,569 + H281DRAFT_02133 0.69 -0.6 271,609 - H281DRAFT_02133 0.72 -0.7 271,609 - H281DRAFT_02133 0.72 -0.5 271,609 - H281DRAFT_02133 0.72 -1.9 271,609 - H281DRAFT_02133 0.72 +1.0 271,609 - H281DRAFT_02133 0.72 +0.7 271,661 + H281DRAFT_02133 0.75 +0.1 271,661 + H281DRAFT_02133 0.75 +0.1 271,661 + H281DRAFT_02133 0.75 -0.9 271,661 + H281DRAFT_02133 0.75 -0.1 271,662 - H281DRAFT_02133 0.75 -0.3 271,662 - H281DRAFT_02133 0.75 +0.3 271,662 - H281DRAFT_02133 0.75 -0.6 271,672 - H281DRAFT_02133 0.76 -0.2 271,691 + H281DRAFT_02133 0.77 -1.5 271,715 + H281DRAFT_02133 0.78 -0.0 271,715 + H281DRAFT_02133 0.78 +0.4 271,715 + H281DRAFT_02133 0.78 +1.2 271,716 - H281DRAFT_02133 0.78 -2.7 271,716 - H281DRAFT_02133 0.78 -0.2 271,716 - H281DRAFT_02133 0.78 -0.5 271,756 + H281DRAFT_02133 0.81 -2.1 271,756 + H281DRAFT_02133 0.81 -0.9 271,757 - H281DRAFT_02133 0.81 -0.1 271,757 - H281DRAFT_02133 0.81 -1.9 271,757 - +1.5 271,781 + H281DRAFT_02133 0.83 +0.1 271,781 + H281DRAFT_02133 0.83 -0.6 271,782 - H281DRAFT_02133 0.83 -0.3 271,782 - H281DRAFT_02133 0.83 -0.6 271,782 - H281DRAFT_02133 0.83 -0.6 271,784 + H281DRAFT_02133 0.83 -1.7 271,784 + H281DRAFT_02133 0.83 +0.6 271,784 + H281DRAFT_02133 0.83 -0.6 271,785 - H281DRAFT_02133 0.83 -1.9 271,789 + H281DRAFT_02133 0.83 -0.2 271,790 - H281DRAFT_02133 0.83 -1.0 271,844 - H281DRAFT_02133 0.87 -1.6 271,963 + +0.2 272,004 + -2.0 272,004 + -0.8 272,005 - -1.2 272,078 - -0.6 272,078 - +1.1 272,082 + +0.4 272,083 - +0.2 272,083 - +3.0 272,083 - +0.2 272,083 - +0.3 272,083 - +0.4 272,087 + +0.4 272,088 - +0.8 272,100 + +1.0 272,100 + -0.1 272,101 - +0.8 272,136 + -0.1 272,136 + +0.5 272,137 - +1.0 272,142 + -0.3 272,142 + -0.1 272,142 + +0.5 272,142 + -0.1 272,143 - +3.5 272,143 - +1.2 272,143 - +0.4 272,143 - +0.7 272,143 - +0.8 272,198 + +0.6 272,198 + -0.0 272,199 - -0.3 272,199 - +0.3 272,205 - +0.5 272,215 + -0.2 272,215 + -0.4 272,216 - +0.5 272,216 - +0.4 272,218 - +0.6 272,396 + +1.2 272,396 + +0.7 272,396 + +0.5 272,396 + +1.5 272,397 - +0.3 272,397 - +0.9 272,397 - -0.1 272,397 - +0.3 272,397 - -0.0 272,397 - -1.5 272,398 + +0.4 272,398 + +0.7 272,398 + +0.3 272,398 + -0.1 272,399 - -0.7 272,399 - -0.5 272,399 - +0.3 272,399 - +0.1 272,399 - +0.2 272,399 - -0.0 272,399 - +1.1 272,399 - -0.3 272,492 - -0.3 272,492 - -0.0 272,492 - +0.6 272,501 - -0.2 272,600 + H281DRAFT_02134 0.15 -1.3 272,638 - +1.7 272,688 + H281DRAFT_02134 0.25 +0.4 272,688 + H281DRAFT_02134 0.25 +0.8 272,691 + H281DRAFT_02134 0.25 +0.4 272,692 - H281DRAFT_02134 0.26 -0.3 272,692 - H281DRAFT_02134 0.26 +0.3 272,698 + H281DRAFT_02134 0.26 -1.3 272,698 + H281DRAFT_02134 0.26 +0.2 272,701 - H281DRAFT_02134 0.27 +0.6 272,745 + H281DRAFT_02134 0.32 +0.5 272,754 + H281DRAFT_02134 0.33 +0.5 272,810 + H281DRAFT_02134 0.39 +0.4 272,853 + H281DRAFT_02134 0.44 +0.0 272,853 + H281DRAFT_02134 0.44 +0.7 272,854 - H281DRAFT_02134 0.44 -0.4 272,854 - H281DRAFT_02134 0.44 -0.2 272,903 - H281DRAFT_02134 0.50 +1.0 272,992 - H281DRAFT_02134 0.60 -0.9 273,089 + H281DRAFT_02134 0.71 +0.2 273,109 + H281DRAFT_02134 0.73 +0.0 273,110 - H281DRAFT_02134 0.73 +0.0 273,112 - H281DRAFT_02134 0.74 +0.7 273,134 - H281DRAFT_02134 0.76 -0.4 273,134 - H281DRAFT_02134 0.76 -0.0 273,209 + H281DRAFT_02134 0.85 +0.2 273,237 - H281DRAFT_02134 0.88 -0.1 273,252 + H281DRAFT_02134 0.89 -0.1 273,252 + H281DRAFT_02134 0.89 +1.2 273,253 - H281DRAFT_02134 0.90 +0.5 273,322 + +0.5 273,344 - -1.1 273,357 + +0.2 273,357 + +0.5 273,357 + +0.7 273,357 + +0.6 273,358 - -1.0 273,358 - +0.7 273,430 + +0.0 273,453 - +0.1 273,453 - +0.1 273,453 - +0.1 273,459 + +0.0 273,459 + +0.6 273,503 + -0.4 273,619 - H281DRAFT_02135 0.28 +0.4 273,619 - H281DRAFT_02135 0.28 -1.4 273,670 + H281DRAFT_02135 0.45 -0.5 273,687 + H281DRAFT_02135 0.50 +0.3 273,687 + H281DRAFT_02135 0.50 -3.1 273,688 - H281DRAFT_02135 0.51 +0.4 273,736 + H281DRAFT_02135 0.67 +0.4 273,736 + H281DRAFT_02135 0.67 -0.5 273,757 + H281DRAFT_02135 0.74 +0.2 273,805 + H281DRAFT_02135 0.90 +0.2 273,806 - -0.1 273,806 - +0.8 273,806 - -1.9 273,817 + +0.8 273,817 + +1.3 273,818 - +0.3 273,818 - -0.0 273,818 - -0.2 273,818 - -0.7 273,838 + +0.2 273,838 + +0.8 273,905 + +1.1 273,905 + +0.5 273,905 + -0.3 273,906 - -0.4 273,906 - -0.5 273,972 + +0.3 273,976 - -0.0 274,129 + +1.2 274,129 + H281DRAFT_02136 0.28 -1.0 274,129 + H281DRAFT_02136 0.28 -2.0 274,190 + H281DRAFT_02136 0.39 +0.4
Or see this region's nucleotide sequence