Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01810 and H281DRAFT_01811 are separated by 103 nucleotides H281DRAFT_01811 and H281DRAFT_01812 are separated by 100 nucleotides H281DRAFT_01812 and H281DRAFT_01813 are separated by 102 nucleotides
H281DRAFT_01810: H281DRAFT_01810 - transcriptional regulator, LysR family, at 711,515 to 712,483
_01810
H281DRAFT_01811: H281DRAFT_01811 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 712,587 to 713,363
_01811
H281DRAFT_01812: H281DRAFT_01812 - Short-chain dehydrogenase, at 713,464 to 714,213
_01812
H281DRAFT_01813: H281DRAFT_01813 - transcriptional regulator, AraC family, at 714,316 to 715,236
_01813
Position (kb) 713
714
715 Strain fitness (log2 ratio) -1
0
1 at 712.936 kb on - strand, within H281DRAFT_01811 at 712.936 kb on - strand, within H281DRAFT_01811 at 713.593 kb on - strand, within H281DRAFT_01812 at 713.947 kb on + strand, within H281DRAFT_01812 at 714.198 kb on + strand at 714.253 kb on + strand at 714.254 kb on - strand at 714.433 kb on + strand, within H281DRAFT_01813 at 714.434 kb on - strand, within H281DRAFT_01813 at 715.045 kb on + strand, within H281DRAFT_01813
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 712,936 - H281DRAFT_01811 0.45 -0.0 712,936 - H281DRAFT_01811 0.45 -0.6 713,593 - H281DRAFT_01812 0.17 -0.2 713,947 + H281DRAFT_01812 0.64 -0.7 714,198 + -0.4 714,253 + +0.5 714,254 - -0.1 714,433 + H281DRAFT_01813 0.13 +0.1 714,434 - H281DRAFT_01813 0.13 -0.4 715,045 + H281DRAFT_01813 0.79 -0.1
Or see this region's nucleotide sequence