Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01520 and H281DRAFT_01521 overlap by 1 nucleotides H281DRAFT_01521 and H281DRAFT_01522 are separated by 610 nucleotides
H281DRAFT_01520: H281DRAFT_01520 - diguanylate cyclase (GGDEF) domain-containing protein, at 391,701 to 393,500
_01520
H281DRAFT_01521: H281DRAFT_01521 - putative spermidine/putrescine transport system substrate-binding protein, at 393,500 to 394,639
_01521
H281DRAFT_01522: H281DRAFT_01522 - amino acid ABC transporter substrate-binding protein, PAAT family, at 395,250 to 396,032
_01522
Position (kb) 393
394
395 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 393.159 kb on - strand, within H281DRAFT_01520 at 393.175 kb on + strand, within H281DRAFT_01520 at 393.176 kb on - strand, within H281DRAFT_01520 at 393.176 kb on - strand, within H281DRAFT_01520 at 393.206 kb on - strand, within H281DRAFT_01520 at 393.471 kb on + strand at 393.684 kb on + strand, within H281DRAFT_01521 at 393.685 kb on - strand, within H281DRAFT_01521 at 393.780 kb on + strand, within H281DRAFT_01521 at 393.781 kb on - strand, within H281DRAFT_01521 at 393.809 kb on + strand, within H281DRAFT_01521 at 393.832 kb on - strand, within H281DRAFT_01521 at 393.856 kb on + strand, within H281DRAFT_01521 at 393.900 kb on + strand, within H281DRAFT_01521 at 394.153 kb on - strand, within H281DRAFT_01521 at 394.270 kb on + strand, within H281DRAFT_01521 at 394.273 kb on - strand, within H281DRAFT_01521 at 394.386 kb on - strand, within H281DRAFT_01521 at 394.646 kb on - strand at 394.832 kb on + strand at 394.833 kb on - strand at 394.902 kb on + strand at 395.120 kb on - strand at 395.120 kb on - strand at 395.120 kb on - strand at 395.315 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 393,159 - H281DRAFT_01520 0.81 +0.4 393,175 + H281DRAFT_01520 0.82 +0.1 393,176 - H281DRAFT_01520 0.82 +0.4 393,176 - H281DRAFT_01520 0.82 -0.2 393,206 - H281DRAFT_01520 0.84 +0.3 393,471 + +1.1 393,684 + H281DRAFT_01521 0.16 +0.7 393,685 - H281DRAFT_01521 0.16 +0.3 393,780 + H281DRAFT_01521 0.25 +1.3 393,781 - H281DRAFT_01521 0.25 +1.1 393,809 + H281DRAFT_01521 0.27 +0.3 393,832 - H281DRAFT_01521 0.29 +0.2 393,856 + H281DRAFT_01521 0.31 +0.4 393,900 + H281DRAFT_01521 0.35 +2.7 394,153 - H281DRAFT_01521 0.57 +1.8 394,270 + H281DRAFT_01521 0.68 +0.8 394,273 - H281DRAFT_01521 0.68 -0.3 394,386 - H281DRAFT_01521 0.78 +0.9 394,646 - -2.7 394,832 + +0.8 394,833 - -3.0 394,902 + -0.8 395,120 - -0.2 395,120 - -2.1 395,120 - -0.4 395,315 + -0.6
Or see this region's nucleotide sequence