Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01251 and H281DRAFT_01252 overlap by 32 nucleotides H281DRAFT_01252 and H281DRAFT_01253 are separated by 35 nucleotides H281DRAFT_01253 and H281DRAFT_01254 are separated by 150 nucleotides
H281DRAFT_01251: H281DRAFT_01251 - NADPH:quinone reductase, at 87,663 to 88,595
_01251
H281DRAFT_01252: H281DRAFT_01252 - hypothetical protein, at 88,564 to 88,668
_01252
H281DRAFT_01253: H281DRAFT_01253 - DNA-binding transcriptional regulator, LysR family, at 88,704 to 89,588
_01253
H281DRAFT_01254: H281DRAFT_01254 - Fatty acid desaturase, at 89,739 to 90,719
_01254
Position (kb) 88
89
90 Strain fitness (log2 ratio) -1
0
1
2 at 87.972 kb on + strand, within H281DRAFT_01251 at 88.046 kb on - strand, within H281DRAFT_01251 at 88.063 kb on - strand, within H281DRAFT_01251 at 88.102 kb on + strand, within H281DRAFT_01251 at 88.185 kb on - strand, within H281DRAFT_01251 at 88.439 kb on - strand, within H281DRAFT_01251 at 88.561 kb on + strand at 88.595 kb on + strand at 88.595 kb on + strand at 88.595 kb on + strand at 88.595 kb on + strand at 88.596 kb on - strand, within H281DRAFT_01252 at 88.596 kb on - strand, within H281DRAFT_01252 at 88.596 kb on - strand, within H281DRAFT_01252 at 88.596 kb on - strand, within H281DRAFT_01252 at 88.927 kb on + strand, within H281DRAFT_01253 at 89.053 kb on - strand, within H281DRAFT_01253 at 89.574 kb on - strand at 89.882 kb on - strand, within H281DRAFT_01254 at 89.931 kb on + strand, within H281DRAFT_01254 at 89.931 kb on + strand, within H281DRAFT_01254 at 89.931 kb on + strand, within H281DRAFT_01254 at 89.931 kb on + strand, within H281DRAFT_01254 at 89.932 kb on - strand, within H281DRAFT_01254 at 89.932 kb on - strand, within H281DRAFT_01254 at 90.109 kb on - strand, within H281DRAFT_01254 at 90.177 kb on - strand, within H281DRAFT_01254 at 90.251 kb on - strand, within H281DRAFT_01254 at 90.330 kb on + strand, within H281DRAFT_01254 at 90.331 kb on - strand, within H281DRAFT_01254 at 90.341 kb on + strand, within H281DRAFT_01254 at 90.579 kb on + strand, within H281DRAFT_01254 at 90.579 kb on + strand, within H281DRAFT_01254
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 87,972 + H281DRAFT_01251 0.33 -0.3 88,046 - H281DRAFT_01251 0.41 +0.5 88,063 - H281DRAFT_01251 0.43 -0.4 88,102 + H281DRAFT_01251 0.47 +0.6 88,185 - H281DRAFT_01251 0.56 -0.2 88,439 - H281DRAFT_01251 0.83 +0.5 88,561 + -0.3 88,595 + +0.8 88,595 + +1.3 88,595 + -0.8 88,595 + +1.2 88,596 - H281DRAFT_01252 0.30 +0.1 88,596 - H281DRAFT_01252 0.30 -1.0 88,596 - H281DRAFT_01252 0.30 +0.5 88,596 - H281DRAFT_01252 0.30 -0.3 88,927 + H281DRAFT_01253 0.25 +0.1 89,053 - H281DRAFT_01253 0.39 +1.8 89,574 - +0.5 89,882 - H281DRAFT_01254 0.15 -0.7 89,931 + H281DRAFT_01254 0.20 -0.4 89,931 + H281DRAFT_01254 0.20 -0.0 89,931 + H281DRAFT_01254 0.20 +0.2 89,931 + H281DRAFT_01254 0.20 -0.5 89,932 - H281DRAFT_01254 0.20 +0.5 89,932 - H281DRAFT_01254 0.20 +0.2 90,109 - H281DRAFT_01254 0.38 +1.3 90,177 - H281DRAFT_01254 0.45 -0.4 90,251 - H281DRAFT_01254 0.52 -0.7 90,330 + H281DRAFT_01254 0.60 -0.4 90,331 - H281DRAFT_01254 0.60 +0.1 90,341 + H281DRAFT_01254 0.61 +0.5 90,579 + H281DRAFT_01254 0.86 +1.1 90,579 + H281DRAFT_01254 0.86 -0.7
Or see this region's nucleotide sequence