Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00739 and H281DRAFT_00740 are separated by 174 nucleotides H281DRAFT_00740 and H281DRAFT_00741 are separated by 28 nucleotides H281DRAFT_00741 and H281DRAFT_00742 are separated by 113 nucleotides
H281DRAFT_00739: H281DRAFT_00739 - transcriptional regulator, GntR family, at 835,738 to 836,478
_00739
H281DRAFT_00740: H281DRAFT_00740 - Predicted dehydrogenase, at 836,653 to 837,750
_00740
H281DRAFT_00741: H281DRAFT_00741 - amino acid ABC transporter membrane protein, PAAT family, at 837,779 to 838,438
_00741
H281DRAFT_00742: H281DRAFT_00742 - amino acid ABC transporter substrate-binding protein, PAAT family, at 838,552 to 839,346
_00742
Position (kb) 836
837
838 Strain fitness (log2 ratio) -1
0
1
2 at 835.817 kb on - strand, within H281DRAFT_00739 at 835.817 kb on - strand, within H281DRAFT_00739 at 836.171 kb on - strand, within H281DRAFT_00739 at 836.811 kb on + strand, within H281DRAFT_00740 at 836.852 kb on - strand, within H281DRAFT_00740 at 836.852 kb on - strand, within H281DRAFT_00740 at 836.984 kb on - strand, within H281DRAFT_00740 at 837.396 kb on + strand, within H281DRAFT_00740 at 837.732 kb on + strand at 837.837 kb on - strand at 837.845 kb on + strand, within H281DRAFT_00741 at 837.845 kb on + strand, within H281DRAFT_00741 at 837.845 kb on + strand, within H281DRAFT_00741 at 837.856 kb on - strand, within H281DRAFT_00741 at 837.895 kb on - strand, within H281DRAFT_00741 at 838.038 kb on + strand, within H281DRAFT_00741 at 838.137 kb on + strand, within H281DRAFT_00741 at 838.138 kb on - strand, within H281DRAFT_00741 at 838.138 kb on - strand, within H281DRAFT_00741 at 838.138 kb on - strand, within H281DRAFT_00741 at 838.218 kb on + strand, within H281DRAFT_00741 at 838.219 kb on - strand, within H281DRAFT_00741
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 835,817 - H281DRAFT_00739 0.11 -0.0 835,817 - H281DRAFT_00739 0.11 -0.1 836,171 - H281DRAFT_00739 0.58 +0.4 836,811 + H281DRAFT_00740 0.14 +0.4 836,852 - H281DRAFT_00740 0.18 +1.3 836,852 - H281DRAFT_00740 0.18 +1.2 836,984 - H281DRAFT_00740 0.30 +0.8 837,396 + H281DRAFT_00740 0.68 -0.7 837,732 + -0.1 837,837 - -0.7 837,845 + H281DRAFT_00741 0.10 +2.1 837,845 + H281DRAFT_00741 0.10 +0.7 837,845 + H281DRAFT_00741 0.10 +0.3 837,856 - H281DRAFT_00741 0.12 -0.2 837,895 - H281DRAFT_00741 0.18 -0.3 838,038 + H281DRAFT_00741 0.39 -0.9 838,137 + H281DRAFT_00741 0.54 +1.2 838,138 - H281DRAFT_00741 0.54 +0.5 838,138 - H281DRAFT_00741 0.54 +0.3 838,138 - H281DRAFT_00741 0.54 +1.0 838,218 + H281DRAFT_00741 0.67 +1.2 838,219 - H281DRAFT_00741 0.67 +0.7
Or see this region's nucleotide sequence