Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00726 and H281DRAFT_00727 overlap by 4 nucleotides H281DRAFT_00727 and H281DRAFT_00728 are separated by 274 nucleotides H281DRAFT_00728 and H281DRAFT_00729 overlap by 1 nucleotides
H281DRAFT_00726: H281DRAFT_00726 - acyl-CoA dehydrogenase, at 819,217 to 820,473
_00726
H281DRAFT_00727: H281DRAFT_00727 - acyl carrier protein, at 820,470 to 820,718
_00727
H281DRAFT_00728: H281DRAFT_00728 - Predicted N-acyltransferase, GNAT family, at 820,993 to 821,526
_00728
H281DRAFT_00729: H281DRAFT_00729 - O-antigen ligase like membrane protein, at 821,526 to 823,064
_00729
Position (kb) 820
821
822 Strain fitness (log2 ratio) -1
0
1
2 at 820.167 kb on - strand, within H281DRAFT_00726 at 820.251 kb on - strand, within H281DRAFT_00726 at 820.881 kb on + strand at 820.892 kb on + strand at 821.292 kb on - strand, within H281DRAFT_00728 at 821.337 kb on - strand, within H281DRAFT_00728 at 821.365 kb on + strand, within H281DRAFT_00728 at 822.025 kb on - strand, within H281DRAFT_00729 at 822.069 kb on - strand, within H281DRAFT_00729 at 822.141 kb on + strand, within H281DRAFT_00729
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 820,167 - H281DRAFT_00726 0.76 +0.3 820,251 - H281DRAFT_00726 0.82 -0.2 820,881 + +0.1 820,892 + +0.1 821,292 - H281DRAFT_00728 0.56 +0.8 821,337 - H281DRAFT_00728 0.64 +0.8 821,365 + H281DRAFT_00728 0.70 +0.9 822,025 - H281DRAFT_00729 0.32 +0.1 822,069 - H281DRAFT_00729 0.35 +2.0 822,141 + H281DRAFT_00729 0.40 +0.4
Or see this region's nucleotide sequence