Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00463 and H281DRAFT_00464 are separated by 354 nucleotides H281DRAFT_00464 and H281DRAFT_00465 overlap by 4 nucleotides H281DRAFT_00465 and H281DRAFT_00466 are separated by 266 nucleotides
H281DRAFT_00463: H281DRAFT_00463 - methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (NADP+), at 516,525 to 517,385
_00463
H281DRAFT_00464: H281DRAFT_00464 - two component transcriptional regulator, LuxR family, at 517,740 to 518,387
_00464
H281DRAFT_00465: H281DRAFT_00465 - PAS/PAC sensor signal transduction histidine kinase /multi-sensor signal transduction histidine kinase, at 518,384 to 520,909
_00465
H281DRAFT_00466: H281DRAFT_00466 - pyruvate dehydrogenase E1 component, at 521,176 to 523,872
_00466
Position (kb) 518
519
520
521 Strain fitness (log2 ratio) -1
0
1 at 517.499 kb on - strand at 517.524 kb on - strand at 517.525 kb on + strand at 517.526 kb on - strand at 517.623 kb on + strand at 517.741 kb on + strand at 519.077 kb on - strand, within H281DRAFT_00465 at 520.141 kb on - strand, within H281DRAFT_00465 at 520.141 kb on - strand, within H281DRAFT_00465 at 520.141 kb on - strand, within H281DRAFT_00465 at 520.222 kb on - strand, within H281DRAFT_00465 at 520.912 kb on + strand at 520.913 kb on - strand at 520.925 kb on - strand at 520.925 kb on - strand at 520.925 kb on - strand at 520.925 kb on - strand at 520.925 kb on - strand at 520.977 kb on + strand at 520.977 kb on + strand at 520.978 kb on - strand at 521.094 kb on + strand at 521.094 kb on + strand at 521.095 kb on - strand at 521.095 kb on - strand at 521.158 kb on + strand at 521.160 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 517,499 - -0.8 517,524 - +0.6 517,525 + +0.9 517,526 - +0.6 517,623 + -0.6 517,741 + -0.3 519,077 - H281DRAFT_00465 0.27 -0.9 520,141 - H281DRAFT_00465 0.70 +0.6 520,141 - H281DRAFT_00465 0.70 +0.3 520,141 - H281DRAFT_00465 0.70 +1.5 520,222 - H281DRAFT_00465 0.73 +0.9 520,912 + +0.1 520,913 - +1.4 520,925 - +0.6 520,925 - -0.1 520,925 - -0.2 520,925 - +0.1 520,925 - +0.9 520,977 + +0.2 520,977 + +0.5 520,978 - +0.3 521,094 + -1.5 521,094 + +0.5 521,095 - -0.0 521,095 - -0.5 521,158 + -0.2 521,160 + +0.5
Or see this region's nucleotide sequence