Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00294 and H281DRAFT_00295 are separated by 66 nucleotides H281DRAFT_00295 and H281DRAFT_00296 are separated by 208 nucleotides H281DRAFT_00296 and H281DRAFT_00297 are separated by 180 nucleotides
H281DRAFT_00294: H281DRAFT_00294 - electron transport complex protein RnfB, at 313,755 to 314,789
_00294
H281DRAFT_00295: H281DRAFT_00295 - transcriptional regulator, TetR family, at 314,856 to 315,554
_00295
H281DRAFT_00296: H281DRAFT_00296 - poly(3-hydroxybutyrate) depolymerase, at 315,763 to 317,040
_00296
H281DRAFT_00297: H281DRAFT_00297 - Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family, at 317,221 to 319,143
_00297
Position (kb) 315
316
317
318 Strain fitness (log2 ratio) -2
-1
0
1 at 314.856 kb on - strand at 314.856 kb on - strand at 315.069 kb on + strand, within H281DRAFT_00295 at 315.069 kb on + strand, within H281DRAFT_00295 at 315.075 kb on + strand, within H281DRAFT_00295 at 315.110 kb on - strand, within H281DRAFT_00295 at 315.188 kb on + strand, within H281DRAFT_00295 at 315.188 kb on + strand, within H281DRAFT_00295 at 315.279 kb on + strand, within H281DRAFT_00295 at 315.280 kb on - strand, within H281DRAFT_00295 at 315.281 kb on + strand, within H281DRAFT_00295 at 315.281 kb on + strand, within H281DRAFT_00295 at 315.281 kb on + strand, within H281DRAFT_00295 at 315.281 kb on + strand, within H281DRAFT_00295 at 315.281 kb on + strand, within H281DRAFT_00295 at 315.282 kb on - strand, within H281DRAFT_00295 at 315.282 kb on - strand, within H281DRAFT_00295 at 315.403 kb on - strand, within H281DRAFT_00295 at 315.403 kb on - strand at 315.427 kb on - strand, within H281DRAFT_00295 at 315.429 kb on + strand, within H281DRAFT_00295 at 315.429 kb on + strand, within H281DRAFT_00295 at 315.429 kb on + strand, within H281DRAFT_00295 at 315.429 kb on + strand, within H281DRAFT_00295 at 315.430 kb on - strand, within H281DRAFT_00295 at 315.537 kb on + strand at 315.538 kb on - strand at 315.678 kb on + strand at 315.679 kb on - strand at 315.679 kb on - strand at 315.870 kb on + strand at 315.871 kb on - strand at 315.871 kb on - strand at 315.875 kb on + strand at 316.106 kb on + strand, within H281DRAFT_00296 at 316.139 kb on + strand, within H281DRAFT_00296 at 316.139 kb on + strand, within H281DRAFT_00296 at 316.140 kb on - strand, within H281DRAFT_00296 at 316.148 kb on + strand, within H281DRAFT_00296 at 316.301 kb on + strand, within H281DRAFT_00296 at 316.346 kb on + strand, within H281DRAFT_00296 at 316.389 kb on + strand, within H281DRAFT_00296 at 316.559 kb on + strand, within H281DRAFT_00296 at 316.625 kb on + strand, within H281DRAFT_00296 at 316.626 kb on - strand, within H281DRAFT_00296 at 316.934 kb on + strand at 316.934 kb on + strand at 317.007 kb on + strand at 317.007 kb on + strand at 317.034 kb on - strand at 317.126 kb on - strand at 317.154 kb on + strand at 317.157 kb on - strand at 317.157 kb on - strand at 317.228 kb on - strand at 317.295 kb on + strand at 317.477 kb on + strand, within H281DRAFT_00297 at 317.478 kb on - strand, within H281DRAFT_00297 at 317.478 kb on - strand, within H281DRAFT_00297 at 317.650 kb on - strand, within H281DRAFT_00297 at 317.656 kb on + strand, within H281DRAFT_00297 at 317.656 kb on + strand, within H281DRAFT_00297 at 317.656 kb on + strand, within H281DRAFT_00297 at 317.657 kb on - strand, within H281DRAFT_00297 at 317.733 kb on - strand, within H281DRAFT_00297 at 317.733 kb on - strand, within H281DRAFT_00297
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 314,856 - +0.2 314,856 - +1.7 315,069 + H281DRAFT_00295 0.30 +0.0 315,069 + H281DRAFT_00295 0.30 +0.4 315,075 + H281DRAFT_00295 0.31 -2.7 315,110 - H281DRAFT_00295 0.36 -0.2 315,188 + H281DRAFT_00295 0.47 +1.0 315,188 + H281DRAFT_00295 0.47 -0.1 315,279 + H281DRAFT_00295 0.61 +0.1 315,280 - H281DRAFT_00295 0.61 -1.5 315,281 + H281DRAFT_00295 0.61 -0.8 315,281 + H281DRAFT_00295 0.61 -0.4 315,281 + H281DRAFT_00295 0.61 +0.4 315,281 + H281DRAFT_00295 0.61 -0.5 315,281 + H281DRAFT_00295 0.61 +0.7 315,282 - H281DRAFT_00295 0.61 -0.7 315,282 - H281DRAFT_00295 0.61 +0.4 315,403 - H281DRAFT_00295 0.78 +0.9 315,403 - +0.1 315,427 - H281DRAFT_00295 0.82 -0.1 315,429 + H281DRAFT_00295 0.82 -0.3 315,429 + H281DRAFT_00295 0.82 -0.1 315,429 + H281DRAFT_00295 0.82 -0.9 315,429 + H281DRAFT_00295 0.82 +0.8 315,430 - H281DRAFT_00295 0.82 +0.3 315,537 + -0.4 315,538 - -1.2 315,678 + -0.4 315,679 - +0.0 315,679 - -0.2 315,870 + +0.9 315,871 - +0.1 315,871 - +1.2 315,875 + +1.0 316,106 + H281DRAFT_00296 0.27 +0.5 316,139 + H281DRAFT_00296 0.29 +0.8 316,139 + H281DRAFT_00296 0.29 +0.7 316,140 - H281DRAFT_00296 0.29 +0.4 316,148 + H281DRAFT_00296 0.30 +0.9 316,301 + H281DRAFT_00296 0.42 +1.3 316,346 + H281DRAFT_00296 0.46 +0.6 316,389 + H281DRAFT_00296 0.49 -0.3 316,559 + H281DRAFT_00296 0.62 +0.3 316,625 + H281DRAFT_00296 0.67 +0.8 316,626 - H281DRAFT_00296 0.68 +1.2 316,934 + +0.4 316,934 + +0.7 317,007 + +0.9 317,007 + +0.7 317,034 - +0.4 317,126 - -1.5 317,154 + +0.5 317,157 - -0.0 317,157 - +0.3 317,228 - +0.8 317,295 + +0.1 317,477 + H281DRAFT_00297 0.13 -0.4 317,478 - H281DRAFT_00297 0.13 +1.4 317,478 - H281DRAFT_00297 0.13 +0.9 317,650 - H281DRAFT_00297 0.22 +0.2 317,656 + H281DRAFT_00297 0.23 +0.3 317,656 + H281DRAFT_00297 0.23 +1.0 317,656 + H281DRAFT_00297 0.23 +0.5 317,657 - H281DRAFT_00297 0.23 +0.4 317,733 - H281DRAFT_00297 0.27 -0.4 317,733 - H281DRAFT_00297 0.27 -0.4
Or see this region's nucleotide sequence