Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c35690

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
3,739,602	+				+0.6
3,739,609	-				-1.9
3,739,616	+				+0.3
3,739,621	+				-0.4
3,739,626	+				-2.5
3,739,626	+				+0.0
3,739,626	+				-0.2
3,739,629	-				-0.6
3,739,634	+				+0.0
3,739,634	+				-0.7
3,739,634	+				+0.8
3,739,637	-				-0.2
3,739,642	-				+0.5
3,739,712	+				+0.3
3,739,720	-				-1.6
3,739,725	+				-0.1
3,739,739	+				-2.5
3,739,759	+				-0.7
3,739,774	-				-0.4
3,739,781	+				-0.7
3,739,781	+				-0.1
3,739,801	+				-1.3
3,739,801	+				+0.1
3,739,801	+				-0.1
3,739,801	+				-0.7
3,739,839	+		PGA1_c35680	0.14	-2.6
3,739,847	+		PGA1_c35680	0.15	-0.4
3,739,855	-		PGA1_c35680	0.16	-1.2
3,739,855	-		PGA1_c35680	0.16	-2.1
3,739,881	+		PGA1_c35680	0.19	-0.4
3,739,881	+		PGA1_c35680	0.19	-0.9
3,739,881	+		PGA1_c35680	0.19	-1.6
3,739,889	-		PGA1_c35680	0.20	-0.8
3,739,889	-		PGA1_c35680	0.20	-0.6
3,739,915	+		PGA1_c35680	0.23	-0.1
3,739,921	-		PGA1_c35680	0.23	-2.8
3,739,921	-		PGA1_c35680	0.23	-0.8
3,739,923	-		PGA1_c35680	0.24	-0.0
3,739,963	-		PGA1_c35680	0.28	-0.9
3,739,978	+		PGA1_c35680	0.30	-1.1
3,740,093	-		PGA1_c35680	0.43	-3.0
3,740,154	-		PGA1_c35680	0.50	-1.3
3,740,154	-		PGA1_c35680	0.50	-1.5
3,740,154	-		PGA1_c35680	0.50	-0.6
3,740,198	+		PGA1_c35680	0.55	-1.5
3,740,208	-		PGA1_c35680	0.56	-0.6
3,740,232	+		PGA1_c35680	0.59	-1.9
3,740,245	+		PGA1_c35680	0.61	-1.2
3,740,317	-		PGA1_c35680	0.69	-1.3
3,740,331	-		PGA1_c35680	0.70	-1.6
3,740,385	-		PGA1_c35680	0.77	-3.2
3,740,398	+		PGA1_c35680	0.78	+0.5
3,740,411	+		PGA1_c35680	0.80	-1.7
3,740,411	+		PGA1_c35680	0.80	-0.7
3,740,498	-		PGA1_c35680	0.90	-1.2
3,740,514	+				-0.9
3,740,514	+				-3.1
3,740,514	+				+0.1
3,740,522	-				-1.3
3,740,582	+				-0.4
3,740,590	-				-1.3
3,740,603	+				-0.2
3,740,604	-				-0.7
3,740,619	-				-1.7
3,740,624	-				-0.6
3,740,624	-				-0.4
3,740,648	-				-1.2
3,740,650	+				-1.1
3,740,650	+				-2.1
3,740,708	-				-1.2
3,740,715	+				+1.1
3,740,766	+				-0.4
3,740,828	-				-0.7
3,740,838	+		PGA1_c35690	0.10	-1.0
3,740,838	+		PGA1_c35690	0.10	-1.4
3,740,838	+		PGA1_c35690	0.10	-0.2
3,740,838	+		PGA1_c35690	0.10	-1.3
3,740,846	-		PGA1_c35690	0.11	-0.5
3,740,862	-		PGA1_c35690	0.11	-1.2
3,740,902	-		PGA1_c35690	0.13	-1.5
3,740,907	-		PGA1_c35690	0.13	-0.7
3,740,948	+		PGA1_c35690	0.15	-0.7
3,740,948	+		PGA1_c35690	0.15	-0.5
3,740,958	+		PGA1_c35690	0.15	-0.3
3,740,958	+		PGA1_c35690	0.15	-1.1
3,740,958	+		PGA1_c35690	0.15	-1.3
3,740,958	+		PGA1_c35690	0.15	+1.1
3,740,961	-		PGA1_c35690	0.15	-1.0
3,741,044	+		PGA1_c35690	0.19	-1.7
3,741,100	+		PGA1_c35690	0.21	-1.1
3,741,138	+		PGA1_c35690	0.22	-0.3
3,741,169	+		PGA1_c35690	0.24	+0.2
3,741,177	-		PGA1_c35690	0.24	-1.0
3,741,234	+		PGA1_c35690	0.26	-3.4
3,741,263	+		PGA1_c35690	0.28	-0.4
3,741,278	+		PGA1_c35690	0.28	-2.0
3,741,278	+		PGA1_c35690	0.28	+0.1
3,741,278	+		PGA1_c35690	0.28	-0.6
3,741,398	-		PGA1_c35690	0.33	-1.3
3,741,422	-		PGA1_c35690	0.34	-2.3
3,741,429	-		PGA1_c35690	0.34	-0.9
3,741,444	-		PGA1_c35690	0.35	-0.6
3,741,444	-		PGA1_c35690	0.35	-1.7
3,741,496	-		PGA1_c35690	0.37	-0.9
3,741,496	-		PGA1_c35690	0.37	-1.9
3,741,499	-		PGA1_c35690	0.37	+0.4
3,741,527	+		PGA1_c35690	0.38	-1.5
3,741,527	+		PGA1_c35690	0.38	-0.7
3,741,535	-		PGA1_c35690	0.39	-2.0
3,741,535	-		PGA1_c35690	0.39	-0.9
3,741,536	+		PGA1_c35690	0.39	-0.1
3,741,536	+		PGA1_c35690	0.39	-1.9
3,741,544	-		PGA1_c35690	0.39	-0.3
3,741,544	-		PGA1_c35690	0.39	-1.8
3,741,544	-		PGA1_c35690	0.39	-2.6
3,741,544	-		PGA1_c35690	0.39	-1.2
3,741,544	-		PGA1_c35690	0.39	-1.6
3,741,544	-		PGA1_c35690	0.39	+0.4
3,741,566	+		PGA1_c35690	0.40	-1.4
3,741,596	+		PGA1_c35690	0.41	-1.1
3,741,637	+		PGA1_c35690	0.43	-1.4
3,741,716	+		PGA1_c35690	0.46	-0.9
3,741,810	-		PGA1_c35690	0.50	-0.1
3,741,883	+		PGA1_c35690	0.53	+0.1
3,741,883	+		PGA1_c35690	0.53	-0.2
3,741,890	-		PGA1_c35690	0.53	-1.5
3,741,992	-		PGA1_c35690	0.57	-0.8
3,741,994	-		PGA1_c35690	0.57	-1.2
3,742,013	-		PGA1_c35690	0.58	-0.4
3,742,115	-		PGA1_c35690	0.62	+0.7
3,742,127	-		PGA1_c35690	0.63	-1.7
3,742,193	+		PGA1_c35690	0.65	-0.6
3,742,230	+		PGA1_c35690	0.67	+0.7
3,742,256	+		PGA1_c35690	0.68	-0.6
3,742,256	+		PGA1_c35690	0.68	+0.1
3,742,264	-		PGA1_c35690	0.68	-0.4
3,742,305	-		PGA1_c35690	0.70	+0.5
3,742,307	+		PGA1_c35690	0.70	-1.3
3,742,315	+		PGA1_c35690	0.70	-1.9
3,742,323	-		PGA1_c35690	0.71	-0.8
3,742,422	+		PGA1_c35690	0.75	-0.7
3,742,447	+		PGA1_c35690	0.76	-1.2
3,742,498	+		PGA1_c35690	0.78	-0.8
3,742,507	-		PGA1_c35690	0.78	-1.3
3,742,546	+		PGA1_c35690	0.80	-0.9
3,742,637	-		PGA1_c35690	0.83	-1.0
3,742,637	-		PGA1_c35690	0.83	+0.0
3,742,644	+		PGA1_c35690	0.84	+0.2
3,742,688	-		PGA1_c35690	0.86	-1.6
3,742,697	-		PGA1_c35690	0.86	+0.6
3,742,702	-		PGA1_c35690	0.86	-1.7
3,742,759	+		PGA1_c35690	0.88	-0.4
3,742,839	+				-0.6
3,742,863	+				-2.0
3,742,871	-				-2.2
3,742,871	-				+0.0
3,742,930	+				-0.9
3,742,930	+				-1.1
3,742,930	+				-0.8
3,742,937	-				+0.3
3,742,938	-				-0.5
3,742,938	-				-0.5
3,742,938	-				-0.4
3,742,938	-				+0.5
3,742,985	+				-0.5
3,742,993	-				-0.8
3,743,011	-				-0.3
3,743,100	+				+0.3
3,743,100	+				-0.2
3,743,100	+				+0.4
3,743,142	-				-0.7
3,743,149	-				-0.7
3,743,152	+				+0.6
3,743,159	+				+0.7
3,743,160	-				-0.1
3,743,160	-				-1.9
3,743,160	-				-0.9
3,743,169	+				+0.2
3,743,169	+				-0.7
3,743,223	-				-0.7
3,743,255	+				-1.3
3,743,283	-				-0.9
3,743,283	-				-2.0
3,743,318	-				-1.2
3,743,318	-				-0.7
3,743,375	+		PGA1_c35700	0.17	-1.8
3,743,454	-		PGA1_c35700	0.28	-0.3
3,743,457	+		PGA1_c35700	0.28	-1.4
3,743,459	-		PGA1_c35700	0.28	-0.1
3,743,465	-		PGA1_c35700	0.29	-1.1
3,743,465	-		PGA1_c35700	0.29	-1.7
3,743,488	-		PGA1_c35700	0.32	-0.1
3,743,516	+		PGA1_c35700	0.36	-0.4
3,743,535	+		PGA1_c35700	0.39	-1.2
3,743,563	-		PGA1_c35700	0.42	-1.5
3,743,563	-		PGA1_c35700	0.42	-0.7
3,743,707	+		PGA1_c35700	0.62	-0.9
3,743,711	-		PGA1_c35700	0.63	-0.5
3,743,770	-		PGA1_c35700	0.71	-1.0
3,743,781	+		PGA1_c35700	0.72	-0.8
3,743,781	+		PGA1_c35700	0.72	-1.9
3,743,789	-		PGA1_c35700	0.73	-1.3
3,743,789	-		PGA1_c35700	0.73	-1.2
3,743,843	+		PGA1_c35700	0.81	+1.1
3,743,852	-		PGA1_c35700	0.82	-0.8
3,743,900	-		PGA1_c35700	0.88	-0.4
3,743,912	-				+0.3
3,743,954	+				-1.4
3,743,965	+				-0.4
3,744,042	+				-0.2
3,744,042	+				+0.5
3,744,043	-				-1.1