Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c24560

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
2,558,681	+		PGA1_c24550	0.32	-1.2
2,558,691	+		PGA1_c24550	0.33	+0.8
2,558,691	+		PGA1_c24550	0.33	-0.3
2,558,691	+		PGA1_c24550	0.33	-0.4
2,558,691	+		PGA1_c24550	0.33	-0.6
2,558,699	-		PGA1_c24550	0.34	+0.3
2,558,699	-		PGA1_c24550	0.34	+0.2
2,558,730	+		PGA1_c24550	0.36	-0.9
2,558,730	+		PGA1_c24550	0.36	+0.2
2,558,753	-		PGA1_c24550	0.38	-0.5
2,558,851	-		PGA1_c24550	0.47	-0.5
2,558,866	-		PGA1_c24550	0.48	-0.1
2,558,918	+		PGA1_c24550	0.53	-0.2
2,558,926	-		PGA1_c24550	0.53	-0.2
2,558,956	+		PGA1_c24550	0.56	+0.3
2,559,122	+		PGA1_c24550	0.70	-0.8
2,559,123	-		PGA1_c24550	0.71	+0.3
2,559,125	+		PGA1_c24550	0.71	+0.2
2,559,125	+		PGA1_c24550	0.71	-0.3
2,559,199	+		PGA1_c24550	0.77	+0.7
2,559,229	-		PGA1_c24550	0.80	+1.0
2,559,244	+		PGA1_c24550	0.81	+0.6
2,559,292	-		PGA1_c24550	0.85	+0.2
2,559,345	+		PGA1_c24550	0.90	-1.4
2,559,353	-				-0.1
2,559,431	+				+0.2
2,559,438	+				-1.1
2,559,439	-				+0.1
2,559,443	+				+1.1
2,559,469	-				-0.2
2,559,470	+				-0.4
2,559,486	-				-0.3
2,559,493	+				-0.4
2,559,528	-				+0.4
2,559,558	+				-0.2
2,559,558	+				+0.7
2,559,558	+				+0.6
2,559,558	+				-0.4
2,559,558	+				-0.1
2,559,558	+				-0.4
2,559,558	+				+0.1
2,559,558	+				-1.1
2,559,558	+				+0.1
2,559,558	+				+0.8
2,559,559	+				+0.1
2,559,566	-				-0.1
2,559,566	-				+0.5
2,559,566	-				+1.1
2,559,566	-				-0.6
2,559,566	-				-0.1
2,559,566	-				+0.3
2,559,566	-				-0.9
2,559,566	-				+0.1
2,559,566	-				+0.9
2,559,566	-				+1.5
2,559,588	-				-1.1
2,559,590	-				-0.3
2,559,590	-				+0.3
2,559,634	-				+0.9
2,559,639	-				+0.8
2,559,648	-				+1.8
2,559,716	+				+0.5
2,559,745	+				+0.2
2,559,769	+				+1.5
2,560,161	+		PGA1_c24560	0.15	+0.9
2,560,200	+		PGA1_c24560	0.16	-1.4
2,560,208	-		PGA1_c24560	0.17	+0.5
2,560,208	-		PGA1_c24560	0.17	-0.4
2,560,300	-		PGA1_c24560	0.19	+1.4
2,560,559	+		PGA1_c24560	0.27	-1.1
2,560,608	+		PGA1_c24560	0.29	+0.9
2,560,616	-		PGA1_c24560	0.29	-1.0
2,560,620	+		PGA1_c24560	0.29	+0.7
2,560,718	-		PGA1_c24560	0.32	+0.0
2,560,791	+		PGA1_c24560	0.34	+0.1
2,560,815	-		PGA1_c24560	0.35	+0.8
2,560,854	+		PGA1_c24560	0.36	-1.2
2,560,864	-		PGA1_c24560	0.36	+0.2
2,560,866	-		PGA1_c24560	0.36	-0.3
2,560,960	-		PGA1_c24560	0.39	+0.0
2,560,966	+		PGA1_c24560	0.39	+0.6
2,560,989	+		PGA1_c24560	0.40	+0.3
2,561,122	-		PGA1_c24560	0.44	+0.3
2,561,249	-		PGA1_c24560	0.48	+2.1
2,561,249	-		PGA1_c24560	0.48	+0.9
2,561,320	-		PGA1_c24560	0.50	+2.7
2,561,512	+		PGA1_c24560	0.55	+1.5
2,561,549	-		PGA1_c24560	0.57	-0.4
2,561,621	+		PGA1_c24560	0.59	+0.4
2,561,657	+		PGA1_c24560	0.60	+0.6
2,561,769	+		PGA1_c24560	0.63	+1.3
2,561,961	+		PGA1_c24560	0.69	+0.1
2,561,961	+		PGA1_c24560	0.69	-0.7
2,561,961	+		PGA1_c24560	0.69	+0.8
2,561,969	-		PGA1_c24560	0.69	+1.3
2,562,027	+		PGA1_c24560	0.71	+0.4
2,562,142	+		PGA1_c24560	0.74	+1.1
2,562,142	+		PGA1_c24560	0.74	+2.1
2,562,142	+		PGA1_c24560	0.74	-0.8
2,562,142	+		PGA1_c24560	0.74	+1.0
2,562,142	+		PGA1_c24560	0.74	+0.1
2,562,142	+		PGA1_c24560	0.74	+0.1
2,562,142	+		PGA1_c24560	0.74	+0.5
2,562,142	+		PGA1_c24560	0.74	+1.2
2,562,142	+		PGA1_c24560	0.74	-0.2
2,562,142	+		PGA1_c24560	0.74	+0.8
2,562,150	-		PGA1_c24560	0.74	+1.8
2,562,150	-		PGA1_c24560	0.74	+1.4
2,562,150	-		PGA1_c24560	0.74	+0.3
2,562,150	-		PGA1_c24560	0.74	+1.8
2,562,166	+		PGA1_c24560	0.75	+0.9
2,562,537	-		PGA1_c24560	0.86	+1.0
2,562,544	+		PGA1_c24560	0.86	+2.0
2,562,544	+		PGA1_c24560	0.86	+0.3
2,562,552	-		PGA1_c24560	0.86	+1.3
2,562,702	+				-0.1
2,562,747	+				+1.1
2,562,747	+				+1.9
2,562,747	+				+1.5
2,562,755	-				+0.5
2,562,800	-				+0.8
2,562,882	-				-0.1
2,562,978	-				-0.7
2,562,989	+				-0.2
2,562,998	+				+0.2
2,563,003	+				-0.3
2,563,003	+				-0.9
2,563,011	-				+0.1
2,563,011	-				+0.6
2,563,119	-				-0.5
2,563,120	+				-1.3
2,563,176	-				+0.7
2,563,205	+		PGA1_c24570	0.13	-2.2
2,563,209	-		PGA1_c24570	0.13	+1.0
2,563,210	+		PGA1_c24570	0.14	+0.2
2,563,213	-		PGA1_c24570	0.14	+0.3
2,563,218	-		PGA1_c24570	0.15	-0.8
2,563,218	-		PGA1_c24570	0.15	-0.2
2,563,284	+		PGA1_c24570	0.22	+1.2
2,563,292	-		PGA1_c24570	0.23	+1.2
2,563,364	-		PGA1_c24570	0.31	-0.7
2,563,378	+		PGA1_c24570	0.33	+0.3
2,563,386	-		PGA1_c24570	0.34	-0.1
2,563,386	-		PGA1_c24570	0.34	-2.0
2,563,431	-		PGA1_c24570	0.39	+1.2
2,563,431	-		PGA1_c24570	0.39	+0.5
2,563,469	+		PGA1_c24570	0.43	-0.5
2,563,472	+		PGA1_c24570	0.43	-0.5
2,563,488	-		PGA1_c24570	0.45	+0.6
2,563,498	-		PGA1_c24570	0.46	-0.2
2,563,498	-		PGA1_c24570	0.46	-0.7
2,563,503	+		PGA1_c24570	0.47	-0.9
2,563,509	-		PGA1_c24570	0.48	+0.2
2,563,511	-		PGA1_c24570	0.48	+0.4
2,563,511	-		PGA1_c24570	0.48	-0.1
2,563,511	-		PGA1_c24570	0.48	+0.3
2,563,511	-		PGA1_c24570	0.48	+0.4
2,563,531	+		PGA1_c24570	0.50	-0.1
2,563,539	+		PGA1_c24570	0.51	+0.6
2,563,547	-		PGA1_c24570	0.52	-0.2
2,563,547	-		PGA1_c24570	0.52	+1.2
2,563,680	-		PGA1_c24570	0.67	+0.9
2,563,781	-		PGA1_c24570	0.78	-1.0
2,563,837	-		PGA1_c24570	0.85	-0.3
2,563,837	-		PGA1_c24570	0.85	-0.5
2,563,837	-		PGA1_c24570	0.85	+0.8
2,563,892	+				-0.1