Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c12110

Experiment: m.b. Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.00625 mg/ml
1,257,541	+		PGA1_c12090	0.71	+0.1
1,257,549	-		PGA1_c12090	0.73	+0.3
1,257,611	-		PGA1_c12090	0.88	+0.4
1,257,664	+				+0.9
1,257,672	+				-0.6
1,257,672	-				+0.9
1,257,672	-				+0.9
1,257,677	+				+0.3
1,257,684	+				-0.6
1,257,684	+				-0.6
1,257,684	+				+0.2
1,257,684	+				-2.2
1,257,684	+				-0.6
1,257,684	+				+1.3
1,257,684	+				-1.7
1,257,684	+				-0.1
1,257,685	-				+0.6
1,257,689	+				+0.8
1,257,692	-				-0.9
1,257,692	-				+0.0
1,257,692	-				+0.2
1,257,692	-				-0.4
1,257,692	-				+0.4
1,257,692	-				+0.6
1,257,692	-				+0.3
1,257,692	-				+1.1
1,257,692	-				-0.8
1,257,692	-				+0.6
1,257,692	-				+0.1
1,257,748	-				+0.5
1,257,777	-				+0.4
1,257,783	+				-0.4
1,257,793	+				+0.9
1,257,801	-				+1.4
1,257,801	-				+0.3
1,257,801	-				-0.4
1,257,801	-				+1.3
1,257,801	-				-0.7
1,257,801	-				-0.0
1,257,801	-				-0.9
1,257,817	+				-0.7
1,257,817	+				-0.7
1,257,817	+				-0.7
1,257,825	-				-0.3
1,257,825	-				-1.8
1,257,835	-				-1.6
1,257,968	-				-1.5
1,257,968	-				-0.9
1,257,972	-				+0.3
1,258,016	+				-0.5
1,258,027	-				+0.3
1,258,039	-				+0.0
1,258,048	+				+0.0
1,258,048	+				-0.4
1,258,049	+				+0.2
1,258,056	-				-1.7
1,258,059	+				+0.6
1,258,237	-		PGA1_c12100	0.55	+1.0
1,258,316	-		PGA1_c12100	0.76	+0.8
1,258,327	+		PGA1_c12100	0.79	-0.3
1,258,335	-		PGA1_c12100	0.81	-0.1
1,258,335	-		PGA1_c12100	0.81	+1.6
1,258,342	-		PGA1_c12100	0.83	-0.4
1,258,344	-		PGA1_c12100	0.84	-2.0
1,258,359	-		PGA1_c12100	0.88	-0.2
1,258,416	+				-0.1
1,258,437	-				-0.3
1,258,448	+				-0.8
1,258,456	+				+0.1
1,258,462	+				-0.3
1,258,479	+				+0.5
1,258,479	+				+0.1
1,258,479	+				-0.0
1,258,479	+				+0.2
1,258,479	+				-0.3
1,258,479	+				-0.3
1,258,479	+				+0.6
1,258,479	+				+0.4
1,258,479	+				-0.6
1,258,479	+				+0.3
1,258,487	-				+0.7
1,258,487	-				-0.8
1,258,488	-				-0.6
1,258,535	-				+1.2
1,258,574	+		PGA1_c12110	0.12	+0.2
1,258,593	-		PGA1_c12110	0.17	+0.5
1,258,594	-		PGA1_c12110	0.17	+0.0
1,258,632	+		PGA1_c12110	0.26	+0.6
1,258,677	-		PGA1_c12110	0.37	+0.7
1,258,698	-		PGA1_c12110	0.42	+0.5
1,258,747	+		PGA1_c12110	0.53	+1.0
1,258,763	+		PGA1_c12110	0.57	+0.1
1,258,771	-		PGA1_c12110	0.59	+0.2
1,258,771	-		PGA1_c12110	0.59	+0.4
1,258,788	-		PGA1_c12110	0.63	-0.2
1,258,788	-		PGA1_c12110	0.63	+0.4
1,258,807	-		PGA1_c12110	0.67	-0.1
1,258,845	-		PGA1_c12110	0.76	+0.4
1,258,886	-		PGA1_c12110	0.86	-2.2
1,258,946	-				-0.1
1,258,962	-				-0.1
1,258,998	+		PGA1_c12120	0.10	+0.5
1,259,050	-		PGA1_c12120	0.19	+0.9
1,259,055	-		PGA1_c12120	0.20	+0.2
1,259,169	-		PGA1_c12120	0.40	+0.1
1,259,188	-		PGA1_c12120	0.44	+0.5
1,259,261	+		PGA1_c12120	0.56	+0.1
1,259,314	-		PGA1_c12120	0.66	+0.3
1,259,325	-		PGA1_c12120	0.68	+0.8
1,259,334	+		PGA1_c12120	0.69	+0.1
1,259,335	-		PGA1_c12120	0.69	+0.2
1,259,433	+		PGA1_c12120	0.87	-0.8
1,259,455	+				+0.7
1,259,455	+				-0.3
1,259,463	-				+0.8
1,259,591	+				+0.2
1,259,591	+				-0.7
1,259,594	-				+0.2
1,259,657	-		PGA1_c12130	0.11	-0.2
1,259,673	+		PGA1_c12130	0.12	-0.6
1,259,713	-		PGA1_c12130	0.15	-0.6
1,259,737	+		PGA1_c12130	0.17	-0.1
1,259,737	+		PGA1_c12130	0.17	-0.4
1,259,737	+		PGA1_c12130	0.17	+0.2
1,259,737	+		PGA1_c12130	0.17	-0.1
1,259,771	+		PGA1_c12130	0.19	-1.8
1,259,784	+		PGA1_c12130	0.20	-0.2
1,259,798	+		PGA1_c12130	0.21	-0.3
1,259,798	+		PGA1_c12130	0.21	-0.5
1,259,811	+		PGA1_c12130	0.22	-0.3
1,259,864	-		PGA1_c12130	0.26	-0.5
1,259,901	+		PGA1_c12130	0.29	-0.2