Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS27945 and BWI76_RS27950 overlap by 4 nucleotides BWI76_RS27950 and BWI76_RS27955 are separated by 243 nucleotides BWI76_RS27955 and BWI76_RS27960 are separated by 114 nucleotides
BWI76_RS27945: BWI76_RS27945 - 2-oxo-3-deoxygalactonate kinase, at 5,795,303 to 5,796,178
_RS27945
BWI76_RS27950: BWI76_RS27950 - transcriptional regulator, at 5,796,175 to 5,796,864
_RS27950
BWI76_RS27955: BWI76_RS27955 - sugar-phosphatase, at 5,797,108 to 5,797,920
_RS27955
BWI76_RS27960: BWI76_RS27960 - alcohol dehydrogenase protein, at 5,798,035 to 5,799,060
_RS27960
Position (kb) 5797
5798 Strain fitness (log2 ratio) -1
0
1 at 5796.152 kb on + strand at 5796.328 kb on - strand, within BWI76_RS27950 at 5796.356 kb on - strand, within BWI76_RS27950 at 5796.381 kb on + strand, within BWI76_RS27950 at 5796.791 kb on - strand, within BWI76_RS27950 at 5796.828 kb on + strand at 5796.860 kb on + strand at 5796.891 kb on - strand at 5797.154 kb on + strand at 5797.207 kb on + strand, within BWI76_RS27955 at 5797.460 kb on + strand, within BWI76_RS27955 at 5797.460 kb on + strand, within BWI76_RS27955 at 5797.468 kb on - strand, within BWI76_RS27955 at 5797.544 kb on - strand, within BWI76_RS27955 at 5797.603 kb on - strand, within BWI76_RS27955 at 5797.662 kb on - strand, within BWI76_RS27955 at 5797.701 kb on + strand, within BWI76_RS27955 at 5797.795 kb on + strand, within BWI76_RS27955 at 5797.942 kb on + strand at 5798.090 kb on - strand at 5798.318 kb on - strand, within BWI76_RS27960 at 5798.396 kb on - strand, within BWI76_RS27960 at 5798.396 kb on - strand, within BWI76_RS27960 at 5798.410 kb on - strand, within BWI76_RS27960 at 5798.579 kb on + strand, within BWI76_RS27960 at 5798.612 kb on + strand, within BWI76_RS27960 at 5798.617 kb on + strand, within BWI76_RS27960 at 5798.624 kb on + strand, within BWI76_RS27960 at 5798.632 kb on - strand, within BWI76_RS27960
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,796,152 + -0.4 5,796,328 - BWI76_RS27950 0.22 -0.5 5,796,356 - BWI76_RS27950 0.26 +0.4 5,796,381 + BWI76_RS27950 0.30 +0.6 5,796,791 - BWI76_RS27950 0.89 +0.6 5,796,828 + -0.3 5,796,860 + +0.1 5,796,891 - +0.5 5,797,154 + -0.4 5,797,207 + BWI76_RS27955 0.12 +0.7 5,797,460 + BWI76_RS27955 0.43 +0.1 5,797,460 + BWI76_RS27955 0.43 +0.5 5,797,468 - BWI76_RS27955 0.44 +1.6 5,797,544 - BWI76_RS27955 0.54 +0.1 5,797,603 - BWI76_RS27955 0.61 -0.2 5,797,662 - BWI76_RS27955 0.68 +0.1 5,797,701 + BWI76_RS27955 0.73 +0.3 5,797,795 + BWI76_RS27955 0.85 +0.9 5,797,942 + -0.2 5,798,090 - +1.7 5,798,318 - BWI76_RS27960 0.28 +0.3 5,798,396 - BWI76_RS27960 0.35 +0.5 5,798,396 - BWI76_RS27960 0.35 -0.0 5,798,410 - BWI76_RS27960 0.37 -0.1 5,798,579 + BWI76_RS27960 0.53 +0.3 5,798,612 + BWI76_RS27960 0.56 -0.3 5,798,617 + BWI76_RS27960 0.57 +0.5 5,798,624 + BWI76_RS27960 0.57 -0.1 5,798,632 - BWI76_RS27960 0.58 -0.2
Or see this region's nucleotide sequence