Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24000 and BWI76_RS24005 overlap by 13 nucleotides BWI76_RS24005 and BWI76_RS24010 overlap by 7 nucleotides BWI76_RS24010 and BWI76_RS24015 are separated by 154 nucleotides
BWI76_RS24000: BWI76_RS24000 - hypothetical protein, at 5,008,889 to 5,009,596
_RS24000
BWI76_RS24005: BWI76_RS24005 - cobalt ABC transporter ATP-binding protein, at 5,009,584 to 5,010,261
_RS24005
BWI76_RS24010: BWI76_RS24010 - hypothetical protein, at 5,010,255 to 5,010,911
_RS24010
BWI76_RS24015: BWI76_RS24015 - transketolase, at 5,011,066 to 5,013,057
_RS24015
Position (kb) 5010
5011 Strain fitness (log2 ratio) -1
0
1 at 5009.284 kb on + strand, within BWI76_RS24000 at 5009.310 kb on - strand, within BWI76_RS24000 at 5009.415 kb on + strand, within BWI76_RS24000 at 5009.525 kb on - strand, within BWI76_RS24000 at 5009.528 kb on - strand at 5009.591 kb on + strand at 5009.591 kb on + strand at 5009.721 kb on + strand, within BWI76_RS24005 at 5009.729 kb on - strand, within BWI76_RS24005 at 5009.828 kb on - strand, within BWI76_RS24005 at 5009.828 kb on - strand, within BWI76_RS24005 at 5010.063 kb on + strand, within BWI76_RS24005 at 5010.119 kb on - strand, within BWI76_RS24005 at 5010.119 kb on - strand, within BWI76_RS24005 at 5010.167 kb on + strand, within BWI76_RS24005 at 5010.346 kb on + strand, within BWI76_RS24010 at 5010.422 kb on + strand, within BWI76_RS24010 at 5010.430 kb on - strand at 5010.759 kb on - strand, within BWI76_RS24010 at 5010.844 kb on - strand, within BWI76_RS24010 at 5011.064 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 5,009,284 + BWI76_RS24000 0.56 -0.5 5,009,310 - BWI76_RS24000 0.59 +0.4 5,009,415 + BWI76_RS24000 0.74 -0.3 5,009,525 - BWI76_RS24000 0.90 +0.2 5,009,528 - +0.4 5,009,591 + +0.1 5,009,591 + -0.3 5,009,721 + BWI76_RS24005 0.20 +1.0 5,009,729 - BWI76_RS24005 0.21 -0.4 5,009,828 - BWI76_RS24005 0.36 -0.2 5,009,828 - BWI76_RS24005 0.36 -0.7 5,010,063 + BWI76_RS24005 0.71 -0.2 5,010,119 - BWI76_RS24005 0.79 -0.4 5,010,119 - BWI76_RS24005 0.79 -0.2 5,010,167 + BWI76_RS24005 0.86 +0.9 5,010,346 + BWI76_RS24010 0.14 +0.4 5,010,422 + BWI76_RS24010 0.25 +0.3 5,010,430 - +1.5 5,010,759 - BWI76_RS24010 0.77 +1.5 5,010,844 - BWI76_RS24010 0.90 +0.2 5,011,064 + -0.0
Or see this region's nucleotide sequence