Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22075

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS22070 and BWI76_RS22075 are separated by 62 nucleotidesBWI76_RS22075 and BWI76_RS22080 are separated by 241 nucleotidesBWI76_RS22080 and BWI76_RS22085 overlap by 11 nucleotides BWI76_RS22070: BWI76_RS22070 - proline/betaine ABC transporter permease ProW, at 4,607,625 to 4,608,689 _RS22070 BWI76_RS22075: BWI76_RS22075 - glycine betaine ABC transporter substrate-binding protein, at 4,608,752 to 4,609,747 _RS22075 BWI76_RS22080: BWI76_RS22080 - AzlC family protein, at 4,609,989 to 4,610,735 _RS22080 BWI76_RS22085: BWI76_RS22085 - L-valine transporter subunit YgaH, at 4,610,725 to 4,611,060 _RS22085 Position (kb) 4608 4609 4610Strain fitness (log2 ratio) -1 0 1at 4607.904 kb on - strand, within BWI76_RS22070at 4608.001 kb on - strand, within BWI76_RS22070at 4608.183 kb on + strand, within BWI76_RS22070at 4608.196 kb on - strand, within BWI76_RS22070at 4608.220 kb on + strand, within BWI76_RS22070at 4608.388 kb on - strand, within BWI76_RS22070at 4608.655 kb on + strandat 4608.840 kb on + strandat 4608.843 kb on - strandat 4608.916 kb on + strand, within BWI76_RS22075at 4608.968 kb on - strand, within BWI76_RS22075at 4609.027 kb on + strand, within BWI76_RS22075at 4609.129 kb on + strand, within BWI76_RS22075at 4609.229 kb on + strand, within BWI76_RS22075at 4609.287 kb on - strand, within BWI76_RS22075at 4609.439 kb on + strand, within BWI76_RS22075at 4609.458 kb on - strand, within BWI76_RS22075at 4609.538 kb on + strand, within BWI76_RS22075at 4609.551 kb on - strand, within BWI76_RS22075at 4609.757 kb on + strandat 4609.819 kb on - strandat 4609.839 kb on - strandat 4609.922 kb on - strandat 4609.924 kb on + strandat 4610.281 kb on - strand, within BWI76_RS22080at 4610.350 kb on + strand, within BWI76_RS22080at 4610.360 kb on - strand, within BWI76_RS22080at 4610.433 kb on + strand, within BWI76_RS22080at 4610.433 kb on + strand, within BWI76_RS22080at 4610.523 kb on + strand, within BWI76_RS22080at 4610.538 kb on - strand, within BWI76_RS22080at 4610.557 kb on - strand, within BWI76_RS22080at 4610.663 kb on + strandat 4610.697 kb on + strandat 4610.699 kb on - strandat 4610.710 kb on - strandat 4610.737 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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4,607,904 - BWI76_RS22070 0.26 -0.0
4,608,001 - BWI76_RS22070 0.35 -0.3
4,608,183 + BWI76_RS22070 0.52 +0.5
4,608,196 - BWI76_RS22070 0.54 -0.3
4,608,220 + BWI76_RS22070 0.56 +0.6
4,608,388 - BWI76_RS22070 0.72 +0.2
4,608,655 + -0.1
4,608,840 + -1.7
4,608,843 - +0.2
4,608,916 + BWI76_RS22075 0.16 -0.6
4,608,968 - BWI76_RS22075 0.22 -0.6
4,609,027 + BWI76_RS22075 0.28 -0.6
4,609,129 + BWI76_RS22075 0.38 -0.1
4,609,229 + BWI76_RS22075 0.48 -0.7
4,609,287 - BWI76_RS22075 0.54 -0.1
4,609,439 + BWI76_RS22075 0.69 +0.2
4,609,458 - BWI76_RS22075 0.71 +0.2
4,609,538 + BWI76_RS22075 0.79 +0.9
4,609,551 - BWI76_RS22075 0.80 -0.1
4,609,757 + -0.6
4,609,819 - -0.6
4,609,839 - -0.8
4,609,922 - +0.3
4,609,924 + -0.0
4,610,281 - BWI76_RS22080 0.39 +0.4
4,610,350 + BWI76_RS22080 0.48 +0.0
4,610,360 - BWI76_RS22080 0.50 -0.4
4,610,433 + BWI76_RS22080 0.59 +0.6
4,610,433 + BWI76_RS22080 0.59 -0.5
4,610,523 + BWI76_RS22080 0.71 -0.2
4,610,538 - BWI76_RS22080 0.73 -0.8
4,610,557 - BWI76_RS22080 0.76 -0.9
4,610,663 + -0.1
4,610,697 + +0.1
4,610,699 - -0.2
4,610,710 - +0.2
4,610,737 + +0.5

Or see this region's nucleotide sequence