Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS19265 and BWI76_RS19270 overlap by 4 nucleotides BWI76_RS19270 and BWI76_RS19275 overlap by 4 nucleotides
BWI76_RS19265: BWI76_RS19265 - multidrug transporter subunit MdtD, at 4,012,544 to 4,013,959
_RS19265
BWI76_RS19270: BWI76_RS19270 - two-component sensor histidine kinase, at 4,013,956 to 4,015,491
_RS19270
BWI76_RS19275: BWI76_RS19275 - DNA-binding response regulator, at 4,015,488 to 4,016,210
_RS19275
Position (kb)
4013
4014
4015
4016 Strain fitness (log2 ratio)
-1
0
1
2 at 4013.012 kb on + strand, within BWI76_RS19265 at 4013.429 kb on - strand, within BWI76_RS19265 at 4013.555 kb on + strand, within BWI76_RS19265 at 4013.612 kb on - strand, within BWI76_RS19265 at 4013.651 kb on - strand, within BWI76_RS19265 at 4013.725 kb on + strand, within BWI76_RS19265 at 4013.759 kb on - strand, within BWI76_RS19265 at 4013.953 kb on + strand at 4014.206 kb on + strand, within BWI76_RS19270 at 4014.287 kb on - strand, within BWI76_RS19270 at 4014.385 kb on + strand, within BWI76_RS19270 at 4014.413 kb on - strand, within BWI76_RS19270 at 4014.604 kb on - strand, within BWI76_RS19270 at 4014.785 kb on + strand, within BWI76_RS19270 at 4015.365 kb on - strand at 4015.803 kb on + strand, within BWI76_RS19275 at 4015.817 kb on + strand, within BWI76_RS19275 at 4015.867 kb on + strand, within BWI76_RS19275 at 4016.167 kb on + strand at 4016.168 kb on - strand at 4016.435 kb on - strand at 4016.454 kb on - strand at 4016.481 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,013,012 + BWI76_RS19265 0.33 -0.3 4,013,429 - BWI76_RS19265 0.62 +0.1 4,013,555 + BWI76_RS19265 0.71 -0.1 4,013,612 - BWI76_RS19265 0.75 -0.0 4,013,651 - BWI76_RS19265 0.78 -0.2 4,013,725 + BWI76_RS19265 0.83 -0.8 4,013,759 - BWI76_RS19265 0.86 +0.4 4,013,953 + -0.0 4,014,206 + BWI76_RS19270 0.16 +0.1 4,014,287 - BWI76_RS19270 0.22 +0.7 4,014,385 + BWI76_RS19270 0.28 +0.6 4,014,413 - BWI76_RS19270 0.30 +2.0 4,014,604 - BWI76_RS19270 0.42 +0.3 4,014,785 + BWI76_RS19270 0.54 -0.1 4,015,365 - +0.1 4,015,803 + BWI76_RS19275 0.44 -0.4 4,015,817 + BWI76_RS19275 0.46 +0.4 4,015,867 + BWI76_RS19275 0.52 +0.4 4,016,167 + -0.2 4,016,168 - +1.7 4,016,435 - -0.5 4,016,454 - +0.1 4,016,481 - -0.2
Or see this region's nucleotide sequence