Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS18910 and BWI76_RS18915 are separated by 38 nucleotides BWI76_RS18915 and BWI76_RS18920 are separated by 371 nucleotides
BWI76_RS18910: BWI76_RS18910 - LysR family transcriptional regulator, at 3,922,474 to 3,923,364
_RS18910
BWI76_RS18915: BWI76_RS18915 - NAD(P)-dependent oxidoreductase, at 3,923,403 to 3,924,227
_RS18915
BWI76_RS18920: BWI76_RS18920 - ATP phosphoribosyltransferase, at 3,924,599 to 3,925,498
_RS18920
Position (kb)
3923
3924
3925 Strain fitness (log2 ratio)
-2
-1
0
1 at 3922.490 kb on + strand at 3922.503 kb on + strand at 3922.586 kb on + strand, within BWI76_RS18910 at 3922.673 kb on + strand, within BWI76_RS18910 at 3922.681 kb on - strand, within BWI76_RS18910 at 3922.683 kb on + strand, within BWI76_RS18910 at 3922.696 kb on - strand, within BWI76_RS18910 at 3922.899 kb on + strand, within BWI76_RS18910 at 3923.095 kb on + strand, within BWI76_RS18910 at 3923.263 kb on - strand, within BWI76_RS18910 at 3923.456 kb on - strand at 3923.834 kb on - strand, within BWI76_RS18915 at 3924.034 kb on - strand, within BWI76_RS18915 at 3924.265 kb on - strand at 3924.265 kb on - strand at 3924.265 kb on - strand at 3924.568 kb on + strand at 3924.568 kb on + strand at 3924.578 kb on + strand at 3924.586 kb on - strand at 3924.586 kb on - strand at 3924.586 kb on - strand at 3924.698 kb on - strand, within BWI76_RS18920 at 3924.720 kb on - strand, within BWI76_RS18920 at 3924.867 kb on - strand, within BWI76_RS18920 at 3925.011 kb on + strand, within BWI76_RS18920
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 3,922,490 + -2.3 3,922,503 + -0.9 3,922,586 + BWI76_RS18910 0.13 -0.5 3,922,673 + BWI76_RS18910 0.22 +0.3 3,922,681 - BWI76_RS18910 0.23 -0.0 3,922,683 + BWI76_RS18910 0.23 -0.2 3,922,696 - BWI76_RS18910 0.25 +0.5 3,922,899 + BWI76_RS18910 0.48 -0.3 3,923,095 + BWI76_RS18910 0.70 -0.0 3,923,263 - BWI76_RS18910 0.89 -0.4 3,923,456 - -0.3 3,923,834 - BWI76_RS18915 0.52 +1.0 3,924,034 - BWI76_RS18915 0.76 -0.3 3,924,265 - +0.3 3,924,265 - -0.6 3,924,265 - -0.1 3,924,568 + -0.0 3,924,568 + +0.2 3,924,578 + -0.2 3,924,586 - -0.3 3,924,586 - -0.4 3,924,586 - +0.2 3,924,698 - BWI76_RS18920 0.11 -0.0 3,924,720 - BWI76_RS18920 0.13 +0.1 3,924,867 - BWI76_RS18920 0.30 +0.0 3,925,011 + BWI76_RS18920 0.46 -1.2
Or see this region's nucleotide sequence