Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS13650 and BWI76_RS13655 overlap by 4 nucleotides BWI76_RS13655 and BWI76_RS13660 overlap by 1 nucleotides BWI76_RS13660 and BWI76_RS13665 overlap by 4 nucleotides
BWI76_RS13650: BWI76_RS13650 - respiratory nitrate reductase subunit gamma, at 2,845,457 to 2,846,137
_RS13650
BWI76_RS13655: BWI76_RS13655 - nitrate reductase molybdenum cofactor assembly chaperone, at 2,846,134 to 2,846,829
_RS13655
BWI76_RS13660: BWI76_RS13660 - nitrate reductase subunit beta, at 2,846,829 to 2,848,373
_RS13660
BWI76_RS13665: BWI76_RS13665 - nitrate reductase subunit alpha, at 2,848,370 to 2,852,110
_RS13665
Position (kb) 2846
2847
2848
2849 Strain fitness (log2 ratio) -1
0
1 at 2846.090 kb on + strand at 2846.096 kb on + strand at 2846.895 kb on - strand at 2847.167 kb on + strand, within BWI76_RS13660 at 2847.288 kb on - strand, within BWI76_RS13660 at 2847.946 kb on - strand, within BWI76_RS13660 at 2848.318 kb on - strand at 2848.556 kb on + strand at 2849.102 kb on - strand, within BWI76_RS13665 at 2849.318 kb on + strand, within BWI76_RS13665
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,846,090 + -0.3 2,846,096 + +0.4 2,846,895 - +0.4 2,847,167 + BWI76_RS13660 0.22 +0.1 2,847,288 - BWI76_RS13660 0.30 +0.1 2,847,946 - BWI76_RS13660 0.72 +1.3 2,848,318 - -0.5 2,848,556 + +0.5 2,849,102 - BWI76_RS13665 0.20 +0.1 2,849,318 + BWI76_RS13665 0.25 -0.6
Or see this region's nucleotide sequence