Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11860 and BWI76_RS11865 are separated by 358 nucleotides BWI76_RS11865 and BWI76_RS11870 are separated by 9 nucleotides BWI76_RS11870 and BWI76_RS11875 are separated by 29 nucleotides
BWI76_RS11860: BWI76_RS11860 - anthranilate synthase component I, at 2,493,929 to 2,495,491
_RS11860
BWI76_RS11865: BWI76_RS11865 - phosphatase, at 2,495,850 to 2,496,719
_RS11865
BWI76_RS11870: BWI76_RS11870 - hypothetical protein, at 2,496,729 to 2,497,349
_RS11870
BWI76_RS11875: BWI76_RS11875 - hypothetical protein, at 2,497,379 to 2,499,277
_RS11875
Position (kb)
2495
2496
2497 Strain fitness (log2 ratio)
-2
-1
0
1 at 2495.032 kb on + strand, within BWI76_RS11860 at 2495.141 kb on - strand, within BWI76_RS11860 at 2495.173 kb on + strand, within BWI76_RS11860 at 2495.199 kb on + strand, within BWI76_RS11860 at 2495.240 kb on - strand, within BWI76_RS11860 at 2495.373 kb on + strand at 2495.453 kb on + strand at 2495.476 kb on + strand at 2495.484 kb on - strand at 2495.946 kb on + strand, within BWI76_RS11865 at 2496.480 kb on - strand, within BWI76_RS11865 at 2496.541 kb on - strand, within BWI76_RS11865 at 2496.588 kb on + strand, within BWI76_RS11865 at 2496.691 kb on + strand at 2496.691 kb on + strand at 2496.699 kb on - strand at 2496.699 kb on - strand at 2496.815 kb on - strand, within BWI76_RS11870 at 2496.927 kb on - strand, within BWI76_RS11870 at 2497.015 kb on + strand, within BWI76_RS11870 at 2497.072 kb on + strand, within BWI76_RS11870 at 2497.083 kb on + strand, within BWI76_RS11870 at 2497.205 kb on + strand, within BWI76_RS11870 at 2497.205 kb on + strand, within BWI76_RS11870 at 2497.423 kb on + strand at 2497.479 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,495,032 + BWI76_RS11860 0.71 -0.1 2,495,141 - BWI76_RS11860 0.78 -0.2 2,495,173 + BWI76_RS11860 0.80 -1.1 2,495,199 + BWI76_RS11860 0.81 -0.7 2,495,240 - BWI76_RS11860 0.84 +1.0 2,495,373 + +0.2 2,495,453 + +1.0 2,495,476 + +0.1 2,495,484 - +0.2 2,495,946 + BWI76_RS11865 0.11 -0.0 2,496,480 - BWI76_RS11865 0.72 +1.2 2,496,541 - BWI76_RS11865 0.79 +0.8 2,496,588 + BWI76_RS11865 0.85 +0.1 2,496,691 + +0.2 2,496,691 + -0.2 2,496,699 - +0.2 2,496,699 - +0.2 2,496,815 - BWI76_RS11870 0.14 -1.5 2,496,927 - BWI76_RS11870 0.32 +0.8 2,497,015 + BWI76_RS11870 0.46 +0.4 2,497,072 + BWI76_RS11870 0.55 -0.4 2,497,083 + BWI76_RS11870 0.57 +0.2 2,497,205 + BWI76_RS11870 0.77 -0.1 2,497,205 + BWI76_RS11870 0.77 +0.4 2,497,423 + -2.0 2,497,479 + +0.2
Or see this region's nucleotide sequence