Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11190 and BWI76_RS11195 are separated by 249 nucleotides BWI76_RS11195 and BWI76_RS11200 are separated by 218 nucleotides BWI76_RS11200 and BWI76_RS11205 are separated by 167 nucleotides
BWI76_RS11190: BWI76_RS11190 - putative TetR/AcrR family transcriptional regulatory protein, at 2,359,329 to 2,359,964
_RS11190
BWI76_RS11195: BWI76_RS11195 - multiple stress resistance protein BhsA, at 2,360,214 to 2,360,471
_RS11195
BWI76_RS11200: BWI76_RS11200 - transpeptidase, at 2,360,690 to 2,361,649
_RS11200
BWI76_RS11205: BWI76_RS11205 - transcription-repair coupling factor, at 2,361,817 to 2,365,263
_RS11205
Position (kb) 2360
2361
2362 Strain fitness (log2 ratio) -1
0
1 at 2359.895 kb on - strand, within BWI76_RS11190 at 2360.202 kb on + strand at 2360.420 kb on + strand, within BWI76_RS11195 at 2360.529 kb on - strand at 2360.737 kb on + strand at 2361.103 kb on - strand, within BWI76_RS11200 at 2361.289 kb on + strand, within BWI76_RS11200 at 2361.427 kb on + strand, within BWI76_RS11200 at 2361.446 kb on - strand, within BWI76_RS11200 at 2361.446 kb on - strand, within BWI76_RS11200
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 2,359,895 - BWI76_RS11190 0.89 +0.3 2,360,202 + +0.1 2,360,420 + BWI76_RS11195 0.80 -0.1 2,360,529 - +0.2 2,360,737 + -0.9 2,361,103 - BWI76_RS11200 0.43 +0.3 2,361,289 + BWI76_RS11200 0.62 +0.9 2,361,427 + BWI76_RS11200 0.77 +0.2 2,361,446 - BWI76_RS11200 0.79 +1.3 2,361,446 - BWI76_RS11200 0.79 +0.9
Or see this region's nucleotide sequence