Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS08915 and BWI76_RS08920 are separated by 202 nucleotides BWI76_RS08920 and BWI76_RS08925 are separated by 42 nucleotides
BWI76_RS08915: BWI76_RS08915 - ATP-dependent RNA helicase RhlE, at 1,876,921 to 1,878,273
_RS08915
BWI76_RS08920: BWI76_RS08920 - ATP-dependent DNA helicase DinG, at 1,878,476 to 1,880,620
_RS08920
BWI76_RS08925: BWI76_RS08925 - DNA-binding protein YbiB, at 1,880,663 to 1,881,631
_RS08925
Position (kb)
1878
1879
1880
1881 Strain fitness (log2 ratio)
-1
0
1
2 at 1877.478 kb on + strand, within BWI76_RS08915 at 1877.556 kb on + strand, within BWI76_RS08915 at 1877.564 kb on - strand, within BWI76_RS08915 at 1878.281 kb on - strand at 1878.315 kb on + strand at 1878.794 kb on - strand, within BWI76_RS08920 at 1878.794 kb on - strand, within BWI76_RS08920 at 1878.970 kb on + strand at 1879.369 kb on + strand, within BWI76_RS08920 at 1879.417 kb on + strand, within BWI76_RS08920 at 1879.455 kb on - strand, within BWI76_RS08920 at 1879.779 kb on + strand, within BWI76_RS08920 at 1879.804 kb on + strand, within BWI76_RS08920 at 1880.646 kb on + strand at 1880.773 kb on + strand, within BWI76_RS08925 at 1880.799 kb on + strand, within BWI76_RS08925 at 1881.086 kb on + strand, within BWI76_RS08925 at 1881.201 kb on - strand, within BWI76_RS08925 at 1881.368 kb on + strand, within BWI76_RS08925 at 1881.510 kb on + strand, within BWI76_RS08925
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,877,478 + BWI76_RS08915 0.41 +1.3 1,877,556 + BWI76_RS08915 0.47 -0.2 1,877,564 - BWI76_RS08915 0.48 +0.2 1,878,281 - +0.2 1,878,315 + -0.7 1,878,794 - BWI76_RS08920 0.15 +0.8 1,878,794 - BWI76_RS08920 0.15 +0.3 1,878,970 + +2.4 1,879,369 + BWI76_RS08920 0.42 -0.1 1,879,417 + BWI76_RS08920 0.44 +0.0 1,879,455 - BWI76_RS08920 0.46 +0.7 1,879,779 + BWI76_RS08920 0.61 +0.4 1,879,804 + BWI76_RS08920 0.62 +0.0 1,880,646 + +0.6 1,880,773 + BWI76_RS08925 0.11 +0.2 1,880,799 + BWI76_RS08925 0.14 -0.1 1,881,086 + BWI76_RS08925 0.44 -0.1 1,881,201 - BWI76_RS08925 0.56 +0.0 1,881,368 + BWI76_RS08925 0.73 -0.4 1,881,510 + BWI76_RS08925 0.87 -0.4
Or see this region's nucleotide sequence