Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS07745 and BWI76_RS07750 are separated by 9 nucleotides BWI76_RS07750 and BWI76_RS07755 are separated by 13 nucleotides BWI76_RS07755 and BWI76_RS07760 overlap by 1 nucleotides
BWI76_RS07745: BWI76_RS07745 - isochorismate synthase EntC, at 1,643,316 to 1,644,491
_RS07745
BWI76_RS07750: BWI76_RS07750 - 2,3-dihydroxybenzoate-AMP ligase, at 1,644,501 to 1,646,108
_RS07750
BWI76_RS07755: BWI76_RS07755 - isochorismatase, at 1,646,122 to 1,646,973
_RS07755
BWI76_RS07760: BWI76_RS07760 - 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, at 1,646,973 to 1,647,728
_RS07760
Position (kb) 1644
1645
1646
1647 Strain fitness (log2 ratio) -1
0
1
2
3 at 1643.579 kb on + strand, within BWI76_RS07745 at 1643.587 kb on - strand, within BWI76_RS07745 at 1643.596 kb on + strand, within BWI76_RS07745 at 1643.670 kb on - strand, within BWI76_RS07745 at 1643.848 kb on + strand, within BWI76_RS07745 at 1643.848 kb on + strand, within BWI76_RS07745 at 1644.263 kb on - strand, within BWI76_RS07745 at 1644.795 kb on - strand, within BWI76_RS07750 at 1644.809 kb on + strand, within BWI76_RS07750 at 1644.844 kb on - strand, within BWI76_RS07750 at 1645.289 kb on - strand, within BWI76_RS07750 at 1645.853 kb on + strand, within BWI76_RS07750 at 1645.886 kb on - strand, within BWI76_RS07750 at 1645.886 kb on - strand, within BWI76_RS07750 at 1645.888 kb on + strand, within BWI76_RS07750 at 1645.929 kb on - strand, within BWI76_RS07750 at 1646.004 kb on + strand at 1646.103 kb on + strand at 1646.110 kb on + strand at 1646.283 kb on - strand, within BWI76_RS07755 at 1646.308 kb on - strand, within BWI76_RS07755 at 1646.351 kb on - strand, within BWI76_RS07755 at 1646.351 kb on - strand, within BWI76_RS07755 at 1647.053 kb on - strand, within BWI76_RS07760 at 1647.090 kb on - strand, within BWI76_RS07760
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,643,579 + BWI76_RS07745 0.22 -0.0 1,643,587 - BWI76_RS07745 0.23 +0.0 1,643,596 + BWI76_RS07745 0.24 -0.9 1,643,670 - BWI76_RS07745 0.30 +0.3 1,643,848 + BWI76_RS07745 0.45 +0.7 1,643,848 + BWI76_RS07745 0.45 -0.1 1,644,263 - BWI76_RS07745 0.81 -0.3 1,644,795 - BWI76_RS07750 0.18 +3.0 1,644,809 + BWI76_RS07750 0.19 +0.5 1,644,844 - BWI76_RS07750 0.21 +0.4 1,645,289 - BWI76_RS07750 0.49 +0.1 1,645,853 + BWI76_RS07750 0.84 -0.3 1,645,886 - BWI76_RS07750 0.86 +0.0 1,645,886 - BWI76_RS07750 0.86 +0.6 1,645,888 + BWI76_RS07750 0.86 +0.2 1,645,929 - BWI76_RS07750 0.89 +0.3 1,646,004 + +0.1 1,646,103 + +0.1 1,646,110 + -0.9 1,646,283 - BWI76_RS07755 0.19 -0.5 1,646,308 - BWI76_RS07755 0.22 -0.4 1,646,351 - BWI76_RS07755 0.27 +0.5 1,646,351 - BWI76_RS07755 0.27 -1.0 1,647,053 - BWI76_RS07760 0.11 +0.5 1,647,090 - BWI76_RS07760 0.15 +1.0
Or see this region's nucleotide sequence