Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS06585 and BWI76_RS06590 overlap by 8 nucleotides BWI76_RS06590 and BWI76_RS06595 overlap by 1 nucleotides BWI76_RS06595 and BWI76_RS06600 are separated by 13 nucleotides BWI76_RS06600 and BWI76_RS06605 are separated by 33 nucleotides
BWI76_RS06585: BWI76_RS06585 - multidrug ABC transporter permease/ATP-binding protein, at 1,383,976 to 1,385,748
_RS06585
BWI76_RS06590: BWI76_RS06590 - multidrug ABC transporter permease/ATP-binding protein, at 1,385,741 to 1,387,519
_RS06590
BWI76_RS06595: BWI76_RS06595 - hypothetical protein, at 1,387,519 to 1,387,749
_RS06595
BWI76_RS06600: BWI76_RS06600 - nitrogen regulatory protein P-II 2, at 1,387,763 to 1,388,101
_RS06600
BWI76_RS06605: BWI76_RS06605 - ammonium transporter, at 1,388,135 to 1,389,421
_RS06605
Position (kb) 1385
1386
1387
1388 Strain fitness (log2 ratio) -1
0
1
2 at 1384.774 kb on - strand, within BWI76_RS06585 at 1384.871 kb on + strand, within BWI76_RS06585 at 1385.137 kb on - strand, within BWI76_RS06585 at 1385.402 kb on + strand, within BWI76_RS06585 at 1385.526 kb on + strand, within BWI76_RS06585 at 1385.620 kb on + strand at 1385.860 kb on - strand at 1385.945 kb on - strand at 1385.947 kb on + strand, within BWI76_RS06590 at 1385.983 kb on + strand, within BWI76_RS06590 at 1386.152 kb on - strand, within BWI76_RS06590 at 1386.370 kb on + strand, within BWI76_RS06590 at 1386.572 kb on - strand, within BWI76_RS06590 at 1386.751 kb on - strand, within BWI76_RS06590 at 1386.902 kb on - strand, within BWI76_RS06590 at 1387.049 kb on - strand, within BWI76_RS06590 at 1387.075 kb on + strand, within BWI76_RS06590 at 1387.300 kb on - strand, within BWI76_RS06590 at 1387.726 kb on + strand, within BWI76_RS06595 at 1387.915 kb on - strand, within BWI76_RS06600 at 1387.945 kb on - strand, within BWI76_RS06600 at 1388.191 kb on + strand at 1388.199 kb on - strand at 1388.271 kb on - strand, within BWI76_RS06605 at 1388.290 kb on + strand, within BWI76_RS06605 at 1388.290 kb on + strand, within BWI76_RS06605 at 1388.298 kb on - strand, within BWI76_RS06605 at 1388.326 kb on + strand, within BWI76_RS06605 at 1388.362 kb on + strand, within BWI76_RS06605 at 1388.366 kb on + strand, within BWI76_RS06605
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,384,774 - BWI76_RS06585 0.45 -0.1 1,384,871 + BWI76_RS06585 0.50 +0.3 1,385,137 - BWI76_RS06585 0.65 +0.2 1,385,402 + BWI76_RS06585 0.80 -0.2 1,385,526 + BWI76_RS06585 0.87 -0.1 1,385,620 + -0.4 1,385,860 - +0.2 1,385,945 - -0.2 1,385,947 + BWI76_RS06590 0.12 +0.3 1,385,983 + BWI76_RS06590 0.14 +0.4 1,386,152 - BWI76_RS06590 0.23 +1.0 1,386,370 + BWI76_RS06590 0.35 +0.2 1,386,572 - BWI76_RS06590 0.47 +0.7 1,386,751 - BWI76_RS06590 0.57 +0.8 1,386,902 - BWI76_RS06590 0.65 -0.4 1,387,049 - BWI76_RS06590 0.74 -0.1 1,387,075 + BWI76_RS06590 0.75 +0.1 1,387,300 - BWI76_RS06590 0.88 +2.0 1,387,726 + BWI76_RS06595 0.90 -0.2 1,387,915 - BWI76_RS06600 0.45 +0.7 1,387,945 - BWI76_RS06600 0.54 +1.4 1,388,191 + -1.0 1,388,199 - -0.2 1,388,271 - BWI76_RS06605 0.11 -0.1 1,388,290 + BWI76_RS06605 0.12 -0.3 1,388,290 + BWI76_RS06605 0.12 -0.5 1,388,298 - BWI76_RS06605 0.13 +0.6 1,388,326 + BWI76_RS06605 0.15 +0.0 1,388,362 + BWI76_RS06605 0.18 +1.0 1,388,366 + BWI76_RS06605 0.18 +0.0
Or see this region's nucleotide sequence