Strain Fitness in Pantoea sp. MT58 around IAI47_14235

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
3,009,293	-				-0.3
3,009,300	-				-0.2
3,009,300	-				+0.4
3,009,303	+				+0.7
3,009,304	-				-1.3
3,009,321	+				-0.3
3,009,331	-				+0.0
3,009,350	+				+0.4
3,009,350	+				-0.9
3,009,350	+				-0.1
3,009,351	-				+1.1
3,009,352	+				-1.1
3,009,378	+				+0.2
3,009,379	-				-0.5
3,009,406	+				+1.4
3,009,449	+				-1.3
3,009,507	+				-0.6
3,009,599	+				-0.5
3,009,602	+				-0.8
3,009,613	+				-0.6
3,009,805	-		IAI47_14230	0.33	-1.8
3,009,815	-		IAI47_14230	0.34	-0.7
3,009,831	+		IAI47_14230	0.37	-0.3
3,009,839	+		IAI47_14230	0.38	-2.1
3,009,839	+		IAI47_14230	0.38	-0.5
3,009,839	+		IAI47_14230	0.38	-0.2
3,009,840	-		IAI47_14230	0.38	-1.7
3,009,894	+		IAI47_14230	0.47	+0.0
3,009,894	+		IAI47_14230	0.47	-0.4
3,009,895	-		IAI47_14230	0.47	+1.2
3,009,927	-		IAI47_14230	0.52	-0.8
3,009,995	-		IAI47_14230	0.63	-1.7
3,010,036	+		IAI47_14230	0.69	-2.4
3,010,037	-		IAI47_14230	0.70	+0.5
3,010,079	+		IAI47_14230	0.76	+0.0
3,010,079	+		IAI47_14230	0.76	-0.9
3,010,080	-		IAI47_14230	0.76	+0.2
3,010,082	-		IAI47_14230	0.77	-1.8
3,010,082	-		IAI47_14230	0.77	-0.4
3,010,101	+		IAI47_14230	0.80	-2.6
3,010,102	-		IAI47_14230	0.80	-1.5
3,010,102	-		IAI47_14230	0.80	-1.2
3,010,119	+		IAI47_14230	0.83	+0.1
3,010,119	+		IAI47_14230	0.83	-1.8
3,010,120	-		IAI47_14230	0.83	-0.8
3,010,180	+				-0.6
3,010,202	-				-0.4
3,010,202	-				-1.1
3,010,283	-				-1.0
3,010,338	+				-1.2
3,010,338	+				-2.3
3,010,348	+				-0.5
3,010,351	+				+0.3
3,010,445	+		IAI47_14235	0.16	+0.2
3,010,463	+		IAI47_14235	0.17	+0.2
3,010,514	+		IAI47_14235	0.21	-0.7
3,010,519	-		IAI47_14235	0.21	+0.6
3,010,522	-		IAI47_14235	0.21	-0.1
3,010,528	-		IAI47_14235	0.22	-0.7
3,010,528	-		IAI47_14235	0.22	+1.7
3,010,528	-		IAI47_14235	0.22	-1.7
3,010,564	-		IAI47_14235	0.24	+1.4
3,010,602	+		IAI47_14235	0.27	-0.8
3,010,604	+		IAI47_14235	0.27	+1.6
3,010,605	-		IAI47_14235	0.27	-1.0
3,010,605	-		IAI47_14235	0.27	-1.7
3,010,605	-		IAI47_14235	0.27	+0.3
3,010,606	+		IAI47_14235	0.27	-1.9
3,010,606	+		IAI47_14235	0.27	+0.5
3,010,607	-		IAI47_14235	0.28	-2.4
3,010,607	-		IAI47_14235	0.28	+0.6
3,010,637	+		IAI47_14235	0.30	-0.7
3,010,638	-		IAI47_14235	0.30	-1.1
3,010,638	-		IAI47_14235	0.30	+1.2
3,010,643	+		IAI47_14235	0.30	+0.3
3,010,644	-		IAI47_14235	0.30	-1.0
3,010,644	-		IAI47_14235	0.30	+0.7
3,010,644	-		IAI47_14235	0.30	+0.3
3,010,648	-		IAI47_14235	0.30	-0.1
3,010,681	-		IAI47_14235	0.33	-1.0
3,010,696	+		IAI47_14235	0.34	+0.0
3,010,697	-		IAI47_14235	0.34	-0.8
3,010,700	-		IAI47_14235	0.34	-1.1
3,010,788	+		IAI47_14235	0.41	-0.5
3,010,793	+		IAI47_14235	0.41	+3.0
3,010,794	-		IAI47_14235	0.41	-0.9
3,010,795	+		IAI47_14235	0.41	+1.0
3,010,795	+		IAI47_14235	0.41	-0.7
3,010,799	+		IAI47_14235	0.41	+0.5
3,010,799	+		IAI47_14235	0.41	-0.3
3,010,799	+		IAI47_14235	0.41	+0.0
3,010,799	+		IAI47_14235	0.41	-0.1
3,010,812	+		IAI47_14235	0.42	+1.0
3,010,813	-		IAI47_14235	0.42	+0.6
3,010,849	-		IAI47_14235	0.45	+0.6
3,010,871	+		IAI47_14235	0.46	-1.8
3,010,871	+		IAI47_14235	0.46	-1.3
3,010,872	-		IAI47_14235	0.47	-0.7
3,010,888	-		IAI47_14235	0.48	+0.4
3,010,934	+		IAI47_14235	0.51	-1.7
3,010,934	+		IAI47_14235	0.51	-0.3
3,010,934	+		IAI47_14235	0.51	-0.5
3,010,934	+		IAI47_14235	0.51	-0.9
3,010,935	-		IAI47_14235	0.51	-0.4
3,010,935	-		IAI47_14235	0.51	+0.7
3,010,936	+		IAI47_14235	0.51	-1.1
3,010,937	-		IAI47_14235	0.51	-0.4
3,010,937	-		IAI47_14235	0.51	-0.3
3,010,937	-		IAI47_14235	0.51	-0.8
3,010,937	-		IAI47_14235	0.51	+0.1
3,010,937	-		IAI47_14235	0.51	-0.7
3,010,994	+		IAI47_14235	0.55	-0.2
3,010,994	+		IAI47_14235	0.55	+0.8
3,010,995	-		IAI47_14235	0.55	-1.6
3,010,995	-		IAI47_14235	0.55	+0.6
3,010,995	-		IAI47_14235	0.55	-2.3
3,010,995	-		IAI47_14235	0.55	+2.4
3,010,995	-		IAI47_14235	0.55	-0.6
3,010,995	-		IAI47_14235	0.55	+0.0
3,010,995	-		IAI47_14235	0.55	-0.2
3,011,082	+		IAI47_14235	0.62	-0.8
3,011,147	+		IAI47_14235	0.66	-0.3
3,011,147	+		IAI47_14235	0.66	+1.0
3,011,147	+		IAI47_14235	0.66	+0.4
3,011,147	+		IAI47_14235	0.66	+1.1
3,011,149	+		IAI47_14235	0.66	+1.0
3,011,149	+		IAI47_14235	0.66	-1.0
3,011,149	+		IAI47_14235	0.66	-2.0
3,011,149	+		IAI47_14235	0.66	+0.6
3,011,149	+		IAI47_14235	0.66	+1.4
3,011,149	+		IAI47_14235	0.66	-2.3
3,011,150	-		IAI47_14235	0.67	-0.5
3,011,150	-		IAI47_14235	0.67	-0.3
3,011,150	-		IAI47_14235	0.67	+1.2
3,011,150	-		IAI47_14235	0.67	+0.9
3,011,150	-		IAI47_14235	0.67	+0.7
3,011,150	-		IAI47_14235	0.67	-0.2
3,011,150	-		IAI47_14235	0.67	-0.5
3,011,151	+		IAI47_14235	0.67	-0.7
3,011,151	+		IAI47_14235	0.67	+1.4
3,011,151	+		IAI47_14235	0.67	+0.8
3,011,151	+		IAI47_14235	0.67	-0.4
3,011,151	+		IAI47_14235	0.67	-0.2
3,011,151	+		IAI47_14235	0.67	-0.3
3,011,151	+		IAI47_14235	0.67	+1.3
3,011,152	-		IAI47_14235	0.67	+0.4
3,011,152	-		IAI47_14235	0.67	+0.3
3,011,152	-		IAI47_14235	0.67	-1.2
3,011,152	-		IAI47_14235	0.67	-0.5
3,011,152	-		IAI47_14235	0.67	-1.1
3,011,152	-		IAI47_14235	0.67	+0.1
3,011,152	-		IAI47_14235	0.67	-1.4
3,011,152	-		IAI47_14235	0.67	+0.9
3,011,152	-		IAI47_14235	0.67	+0.5
3,011,152	-		IAI47_14235	0.67	+0.2
3,011,152	-		IAI47_14235	0.67	+0.4
3,011,156	+		IAI47_14235	0.67	-1.0
3,011,156	+		IAI47_14235	0.67	+0.5
3,011,156	+		IAI47_14235	0.67	+0.3
3,011,157	-		IAI47_14235	0.67	-1.1
3,011,163	+		IAI47_14235	0.67	+0.2
3,011,164	-		IAI47_14235	0.68	-1.5
3,011,184	-		IAI47_14235	0.69	-0.7
3,011,219	+		IAI47_14235	0.71	-0.6
3,011,235	+		IAI47_14235	0.73	+0.3
3,011,236	-		IAI47_14235	0.73	-0.6
3,011,236	-		IAI47_14235	0.73	-0.2
3,011,273	+		IAI47_14235	0.75	+0.4
3,011,273	+		IAI47_14235	0.75	+0.3
3,011,273	+		IAI47_14235	0.75	-0.6
3,011,273	+		IAI47_14235	0.75	-1.6
3,011,273	+		IAI47_14235	0.75	-0.2
3,011,299	-		IAI47_14235	0.77	-0.2
3,011,310	+		IAI47_14235	0.78	-1.7
3,011,311	-		IAI47_14235	0.78	-0.1
3,011,311	-		IAI47_14235	0.78	+0.8
3,011,311	-		IAI47_14235	0.78	-0.4
3,011,317	-		IAI47_14235	0.79	+0.4
3,011,367	-		IAI47_14235	0.82	-1.0
3,011,384	-		IAI47_14235	0.83	+0.9
3,011,392	+		IAI47_14235	0.84	-0.3
3,011,392	+		IAI47_14235	0.84	+0.3
3,011,392	+		IAI47_14235	0.84	-0.4
3,011,393	-		IAI47_14235	0.84	+0.1
3,011,393	-		IAI47_14235	0.84	-1.1
3,011,417	+		IAI47_14235	0.86	-0.6
3,011,417	+		IAI47_14235	0.86	-0.7
3,011,417	+		IAI47_14235	0.86	-0.6
3,011,417	+		IAI47_14235	0.86	-2.2
3,011,417	+		IAI47_14235	0.86	-0.4
3,011,418	-		IAI47_14235	0.86	+0.4
3,011,418	-		IAI47_14235	0.86	+0.7
3,011,418	-		IAI47_14235	0.86	+0.8
3,011,418	-		IAI47_14235	0.86	-1.2
3,011,418	-		IAI47_14235	0.86	-1.6
3,011,418	-		IAI47_14235	0.86	-0.5
3,011,418	-		IAI47_14235	0.86	+0.0
3,011,418	-		IAI47_14235	0.86	-0.2
3,011,418	-		IAI47_14235	0.86	+0.1
3,011,418	-		IAI47_14235	0.86	+1.1
3,011,418	-		IAI47_14235	0.86	+0.4
3,011,423	+		IAI47_14235	0.86	-0.8
3,011,423	+		IAI47_14235	0.86	+0.3
3,011,423	+		IAI47_14235	0.86	-1.2
3,011,424	-		IAI47_14235	0.86	-0.4
3,011,424	-		IAI47_14235	0.86	+1.1
3,011,424	-		IAI47_14235	0.86	-0.9
3,011,440	+		IAI47_14235	0.87	-0.7
3,011,441	-		IAI47_14235	0.87	-0.6
3,011,485	+				-0.6
3,011,485	+				+0.7
3,011,486	-				-0.4
3,011,489	+				-0.7
3,011,489	+				+0.3
3,011,490	-				-1.3
3,011,490	-				-0.7
3,011,490	-				-0.4
3,011,490	-				+2.5
3,011,491	+				+0.0
3,011,491	+				-0.3
3,011,491	+				-0.1
3,011,491	+				+0.4
3,011,491	+				+2.6
3,011,491	+				-0.1
3,011,491	+				+1.6
3,011,491	+				+0.1
3,011,492	-				+0.1
3,011,492	-				+0.2
3,011,492	-				-0.6
3,011,492	-				-0.8
3,011,492	-				+0.7
3,011,492	-				+0.4
3,011,492	-				-0.6
3,011,492	-				-0.2
3,011,533	+				+0.1
3,011,533	+				-0.8
3,011,533	+				+0.9
3,011,533	+				+0.8
3,011,533	+				+0.9
3,011,533	+				-0.0
3,011,533	+				+2.3
3,011,533	+				-1.0
3,011,533	+				-0.7
3,011,534	-				-0.4
3,011,534	-				-0.1
3,011,534	-				+0.9
3,011,534	-				+1.1
3,011,534	-				+0.1
3,011,534	-				+0.0
3,011,534	-				+0.0
3,011,553	+				+0.4
3,011,553	+				-0.1
3,011,554	-				+0.8
3,011,572	+				-0.3
3,011,572	+				+0.1
3,011,573	-				-1.6
3,011,573	-				-0.3
3,011,573	-				-0.1
3,011,590	+				-0.6
3,011,590	+				-0.2
3,011,590	+				+1.6
3,011,590	+				-0.4
3,011,591	-				+0.9
3,011,591	-				-0.9
3,011,620	+				-0.5
3,011,620	+				-1.7
3,011,621	-				-0.2
3,011,633	-				+0.2
3,011,706	-		IAI47_14240	0.14	-2.3
3,011,706	-		IAI47_14240	0.14	-0.6
3,011,706	-		IAI47_14240	0.14	+1.1
3,011,713	+		IAI47_14240	0.15	+1.4
3,011,713	+		IAI47_14240	0.15	+2.9
3,011,713	+		IAI47_14240	0.15	+2.6
3,011,714	-		IAI47_14240	0.16	+0.4
3,011,747	+		IAI47_14240	0.21	+0.4
3,011,747	+		IAI47_14240	0.21	+0.9
3,011,747	+		IAI47_14240	0.21	-0.5
3,011,747	+		IAI47_14240	0.21	+0.1
3,011,747	+		IAI47_14240	0.21	-0.8
3,011,747	+		IAI47_14240	0.21	+1.0
3,011,748	-		IAI47_14240	0.21	+0.5
3,011,748	-		IAI47_14240	0.21	+0.2
3,011,748	-		IAI47_14240	0.21	-1.5
3,011,796	+		IAI47_14240	0.28	-0.9
3,011,797	-		IAI47_14240	0.28	-0.2
3,011,797	-		IAI47_14240	0.28	-1.2
3,011,805	-		IAI47_14240	0.29	-0.3
3,011,812	+		IAI47_14240	0.30	+0.3
3,011,812	+		IAI47_14240	0.30	+0.4
3,011,812	+		IAI47_14240	0.30	+0.7
3,011,812	+		IAI47_14240	0.30	+2.1
3,011,813	-		IAI47_14240	0.31	-1.0
3,011,813	-		IAI47_14240	0.31	-0.0
3,011,814	-		IAI47_14240	0.31	-0.8
3,011,837	-		IAI47_14240	0.34	+0.7
3,011,850	+		IAI47_14240	0.36	+0.6
3,011,851	-		IAI47_14240	0.36	+0.4
3,011,853	+		IAI47_14240	0.37	-0.9
3,011,853	+		IAI47_14240	0.37	+0.3
3,011,853	+		IAI47_14240	0.37	+1.0
3,011,854	-		IAI47_14240	0.37	-0.2
3,011,854	-		IAI47_14240	0.37	+0.8
3,011,854	-		IAI47_14240	0.37	+0.1
3,011,854	-		IAI47_14240	0.37	-1.0
3,011,854	-		IAI47_14240	0.37	+0.7
3,011,874	+		IAI47_14240	0.40	+0.6
3,011,874	+		IAI47_14240	0.40	+3.3
3,011,874	+		IAI47_14240	0.40	-0.1
3,011,875	-		IAI47_14240	0.40	-1.1
3,011,875	-		IAI47_14240	0.40	+0.8
3,011,875	-		IAI47_14240	0.40	+0.3
3,011,875	-		IAI47_14240	0.40	-0.6
3,011,875	-		IAI47_14240	0.40	+0.2
3,011,934	+		IAI47_14240	0.49	+0.6
3,011,934	+		IAI47_14240	0.49	+0.2
3,011,935	-		IAI47_14240	0.49	-1.9
3,011,935	-		IAI47_14240	0.49	+1.2
3,011,935	-		IAI47_14240	0.49	+0.6
3,011,935	-		IAI47_14240	0.49	-0.8
3,011,935	-		IAI47_14240	0.49	-0.6
3,011,948	+		IAI47_14240	0.51	-1.3
3,011,948	+		IAI47_14240	0.51	-0.9
3,011,949	-		IAI47_14240	0.51	+0.4
3,011,949	-		IAI47_14240	0.51	+0.2
3,012,008	+		IAI47_14240	0.60	-1.8
3,012,009	-		IAI47_14240	0.60	-0.8
3,012,029	+		IAI47_14240	0.63	-1.0
3,012,029	+		IAI47_14240	0.63	-0.6
3,012,029	+		IAI47_14240	0.63	+0.1
3,012,029	+		IAI47_14240	0.63	-0.2
3,012,029	+		IAI47_14240	0.63	-1.1
3,012,029	+		IAI47_14240	0.63	-0.4
3,012,030	-		IAI47_14240	0.64	+1.9
3,012,030	-		IAI47_14240	0.64	+0.8
3,012,030	-		IAI47_14240	0.64	-0.1
3,012,030	-		IAI47_14240	0.64	-0.9
3,012,030	-		IAI47_14240	0.64	-1.0
3,012,030	-		IAI47_14240	0.64	+0.1
3,012,030	-		IAI47_14240	0.64	+0.6
3,012,030	-		IAI47_14240	0.64	+1.2
3,012,074	-		IAI47_14240	0.70	-0.3
3,012,125	+		IAI47_14240	0.78	-0.9
3,012,125	+		IAI47_14240	0.78	-0.7
3,012,126	-		IAI47_14240	0.78	+0.7
3,012,126	-		IAI47_14240	0.78	-2.0
3,012,136	+		IAI47_14240	0.80	-0.1
3,012,137	-		IAI47_14240	0.80	+0.4
3,012,137	-		IAI47_14240	0.80	+0.1
3,012,227	+				-0.7
3,012,228	-				+0.8
3,012,261	-				+0.7
3,012,261	-				+0.0
3,012,262	+				-0.2
3,012,294	+				+0.1
3,012,294	+				-0.7
3,012,294	+				-0.5
3,012,294	+				-0.3
3,012,294	+				+0.2
3,012,295	-				+1.7
3,012,295	-				-0.4
3,012,297	+				-0.6
3,012,297	+				+0.1
3,012,297	+				-0.1
3,012,298	-				+0.6
3,012,298	-				+0.9
3,012,298	-				-0.2
3,012,300	+				-0.8
3,012,318	+				+0.3
3,012,318	+				-1.6
3,012,319	-				+0.4
3,012,319	-				-0.1
3,012,319	-				+0.4
3,012,512	-		IAI47_14245	0.23	+0.1
3,012,546	+		IAI47_14245	0.27	-1.7
3,012,547	-		IAI47_14245	0.27	+0.0