Strain Fitness in Pantoea sp. MT58 around IAI47_11065

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,330,712	-				-1.0
2,330,726	+				-0.3
2,330,814	+		IAI47_11060	0.14	+0.3
2,330,815	-		IAI47_11060	0.14	+2.0
2,330,883	+		IAI47_11060	0.22	+0.6
2,330,883	+		IAI47_11060	0.22	+0.5
2,330,884	-		IAI47_11060	0.22	+0.7
2,330,884	-		IAI47_11060	0.22	+1.8
2,330,884	-		IAI47_11060	0.22	+1.2
2,330,916	+		IAI47_11060	0.26	+0.3
2,330,917	-		IAI47_11060	0.26	-0.0
2,330,991	+		IAI47_11060	0.34	-0.1
2,330,991	+		IAI47_11060	0.34	+0.5
2,330,991	+		IAI47_11060	0.34	+1.3
2,330,991	+		IAI47_11060	0.34	+1.4
2,330,992	-		IAI47_11060	0.34	-0.3
2,330,992	-		IAI47_11060	0.34	+0.4
2,330,992	-		IAI47_11060	0.34	+2.6
2,331,133	+		IAI47_11060	0.50	-1.4
2,331,133	+		IAI47_11060	0.50	-1.1
2,331,134	-		IAI47_11060	0.50	+0.6
2,331,134	-		IAI47_11060	0.50	-0.2
2,331,146	+		IAI47_11060	0.51	+0.6
2,331,146	+		IAI47_11060	0.51	-0.5
2,331,146	+		IAI47_11060	0.51	-0.8
2,331,146	+		IAI47_11060	0.51	-0.3
2,331,146	+		IAI47_11060	0.51	-0.2
2,331,146	+		IAI47_11060	0.51	-0.5
2,331,146	+		IAI47_11060	0.51	-0.2
2,331,147	-		IAI47_11060	0.52	-2.1
2,331,147	-		IAI47_11060	0.52	-0.8
2,331,147	-		IAI47_11060	0.52	+1.9
2,331,148	+		IAI47_11060	0.52	-1.5
2,331,149	-		IAI47_11060	0.52	-0.4
2,331,149	-		IAI47_11060	0.52	-2.0
2,331,149	-		IAI47_11060	0.52	-0.0
2,331,149	-		IAI47_11060	0.52	-0.0
2,331,169	-		IAI47_11060	0.54	-0.0
2,331,169	-		IAI47_11060	0.54	+0.4
2,331,208	-		IAI47_11060	0.58	+1.3
2,331,218	+		IAI47_11060	0.59	-2.2
2,331,219	-		IAI47_11060	0.60	-0.8
2,331,263	+		IAI47_11060	0.65	+0.3
2,331,264	-		IAI47_11060	0.65	+1.5
2,331,266	-		IAI47_11060	0.65	+0.3
2,331,266	-		IAI47_11060	0.65	-1.7
2,331,294	+		IAI47_11060	0.68	-0.5
2,331,294	+		IAI47_11060	0.68	+2.2
2,331,295	-		IAI47_11060	0.68	-0.7
2,331,295	-		IAI47_11060	0.68	+0.6
2,331,295	-		IAI47_11060	0.68	+0.6
2,331,337	+		IAI47_11060	0.73	-0.6
2,331,344	-		IAI47_11060	0.74	+0.8
2,331,445	-		IAI47_11060	0.85	+1.4
2,331,445	-		IAI47_11060	0.85	-0.8
2,331,445	-		IAI47_11060	0.85	+2.0
2,331,533	+				+0.5
2,331,533	+				-0.0
2,331,533	+				+0.7
2,331,533	+				+0.3
2,331,534	-				-1.2
2,331,534	-				+1.8
2,331,534	-				-1.0
2,331,576	+				+0.8
2,331,610	+				+1.2
2,331,610	+				-0.3
2,331,610	+				-1.0
2,331,611	-				+0.3
2,331,618	-				-0.1
2,331,631	-				+0.3
2,331,696	+				-0.8
2,331,696	+				-1.3
2,331,696	+				+1.7
2,331,696	+				+1.2
2,331,702	+				-0.2
2,331,756	+		IAI47_11065	0.13	+1.0
2,331,757	-		IAI47_11065	0.13	-0.8
2,331,792	+		IAI47_11065	0.17	+0.7
2,331,792	+		IAI47_11065	0.17	-0.2
2,331,792	+		IAI47_11065	0.17	-0.9
2,331,792	+		IAI47_11065	0.17	-0.8
2,331,793	-		IAI47_11065	0.17	+1.0
2,331,793	-		IAI47_11065	0.17	+0.2
2,331,793	-		IAI47_11065	0.17	-1.2
2,331,794	+		IAI47_11065	0.17	+0.6
2,331,795	-		IAI47_11065	0.17	-0.7
2,331,800	+		IAI47_11065	0.18	+1.6
2,331,883	+		IAI47_11065	0.28	+1.6
2,331,883	+		IAI47_11065	0.28	+1.6
2,331,883	+		IAI47_11065	0.28	+0.8
2,331,965	+		IAI47_11065	0.37	-0.5
2,331,966	-		IAI47_11065	0.37	-1.4
2,332,080	+		IAI47_11065	0.51	+1.2
2,332,081	-		IAI47_11065	0.51	-0.2
2,332,131	+		IAI47_11065	0.56	-0.0
2,332,132	-		IAI47_11065	0.57	+0.9
2,332,230	-		IAI47_11065	0.68	-0.2
2,332,315	+		IAI47_11065	0.78	+0.7
2,332,316	-		IAI47_11065	0.78	-0.5
2,332,359	-		IAI47_11065	0.83	-1.0
2,332,359	-		IAI47_11065	0.83	-0.7
2,332,374	+		IAI47_11065	0.85	+1.6
2,332,375	-		IAI47_11065	0.85	-0.2
2,332,375	-		IAI47_11065	0.85	-0.8
2,332,375	-		IAI47_11065	0.85	-0.9
2,332,451	+				+0.9
2,332,452	-				-1.0
2,332,485	+				+0.9
2,332,485	+				+0.3
2,332,486	-				+0.5
2,332,486	-				-0.8
2,332,490	+				-1.2
2,332,491	-				-0.7
2,332,578	+				-0.0
2,332,579	-				+0.1
2,332,579	-				+1.0
2,332,581	+				+0.2
2,332,581	+				+0.7
2,332,582	-				+0.3
2,332,662	+		IAI47_11070	0.17	+0.0
2,332,693	+		IAI47_11070	0.23	+0.2
2,332,694	-		IAI47_11070	0.23	+0.6
2,332,695	+		IAI47_11070	0.23	+0.1
2,332,696	-		IAI47_11070	0.23	+0.2
2,332,696	-		IAI47_11070	0.23	-0.9
2,332,696	-		IAI47_11070	0.23	+0.2
2,332,696	-		IAI47_11070	0.23	-2.0
2,332,804	+		IAI47_11070	0.45	+1.0
2,332,804	+		IAI47_11070	0.45	-0.8
2,332,804	+		IAI47_11070	0.45	-0.5
2,332,804	+		IAI47_11070	0.45	-0.4
2,332,805	-		IAI47_11070	0.45	+0.5
2,332,805	-		IAI47_11070	0.45	-1.2
2,332,918	+		IAI47_11070	0.68	-0.8
2,332,918	+		IAI47_11070	0.68	+0.6
2,332,918	+		IAI47_11070	0.68	-0.2
2,332,919	-		IAI47_11070	0.68	-1.1
2,332,919	-		IAI47_11070	0.68	+1.6
2,332,997	-		IAI47_11070	0.84	+0.7
2,332,997	-		IAI47_11070	0.84	+0.9
2,333,074	+				+1.2
2,333,074	+				-1.0
2,333,074	+				-1.7
2,333,074	+				+1.2
2,333,074	+				+1.0
2,333,077	+				+1.2
2,333,077	+				+1.2
2,333,077	+				-0.5
2,333,078	-				+0.1
2,333,078	-				+0.3
2,333,078	-				-0.6
2,333,078	-				+0.4
2,333,078	-				-0.9
2,333,086	+				-0.7
2,333,086	+				+1.6
2,333,086	+				+0.8
2,333,086	+				+1.8
2,333,086	+				-0.2
2,333,087	-				-0.6
2,333,087	-				+0.2
2,333,087	-				-1.0
2,333,087	-				-1.2
2,333,088	+				+1.0
2,333,088	+				-1.0
2,333,088	+				+0.6
2,333,089	-				+1.9
2,333,089	-				+0.3
2,333,098	+				+0.3
2,333,098	+				+1.8
2,333,099	-				+0.0
2,333,099	-				-1.0
2,333,138	+				-0.5
2,333,138	+				-1.7
2,333,138	+				+0.2
2,333,138	+				-0.4
2,333,138	+				+0.5
2,333,138	+				+0.7
2,333,138	+				+0.2
2,333,138	+				+0.8
2,333,139	-				+1.0
2,333,139	-				-1.1
2,333,139	-				+0.8
2,333,157	+				+0.5
2,333,158	-				+0.8
2,333,172	+				-1.2
2,333,188	+				-0.4
2,333,196	-				+1.0
2,333,221	+				+0.3
2,333,295	-				-0.0
2,333,371	+				+1.2
2,333,372	-				-1.2
2,333,477	+				+0.8
2,333,477	+				-1.4
2,333,477	+				-0.9
2,333,477	+				+1.3
2,333,477	+				+0.6
2,333,478	-				+1.5
2,333,478	-				-0.2
2,333,478	-				+0.5
2,333,498	+		IAI47_11075	0.12	-1.6
2,333,498	+		IAI47_11075	0.12	-1.3
2,333,499	-		IAI47_11075	0.12	-0.7
2,333,499	-		IAI47_11075	0.12	-0.6
2,333,501	+		IAI47_11075	0.12	-0.3