Strain Fitness in Pantoea sp. MT58 around IAI47_10985

Experiment: Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,319,131	-				-0.9
2,319,131	-				+1.7
2,319,148	-				+2.2
2,319,159	-				+1.7
2,319,164	-				+0.8
2,319,164	-				+0.4
2,319,164	-				-0.1
2,319,164	-				+1.8
2,319,186	-				-0.1
2,319,236	-				-0.0
2,319,236	-				-0.2
2,319,236	-				+0.2
2,319,236	-				+2.2
2,319,239	-				+1.2
2,319,239	-				+0.6
2,319,239	-				-0.0
2,319,239	-				+1.2
2,319,280	-				+0.0
2,319,333	+				-0.7
2,319,333	+				-0.3
2,319,334	-				+0.4
2,319,356	+				+0.7
2,319,356	+				-0.4
2,319,357	-				+2.3
2,319,365	+				-1.9
2,319,365	+				+2.0
2,319,366	-				-0.5
2,319,397	-				+0.5
2,319,397	-				+0.8
2,319,443	+		IAI47_10990	0.12	-0.0
2,319,443	+		IAI47_10990	0.12	+0.6
2,319,444	-		IAI47_10990	0.12	+0.8
2,319,472	-		IAI47_10990	0.15	+0.5
2,319,478	+		IAI47_10990	0.16	-0.1
2,319,526	-		IAI47_10990	0.22	+1.1
2,319,526	-		IAI47_10990	0.22	+0.9
2,319,555	+		IAI47_10990	0.26	+0.4
2,319,581	+		IAI47_10990	0.30	+2.7
2,319,581	+		IAI47_10990	0.30	+0.2
2,319,581	+		IAI47_10990	0.30	+0.5
2,319,581	+		IAI47_10990	0.30	-0.7
2,319,582	-		IAI47_10990	0.30	+0.7
2,319,582	-		IAI47_10990	0.30	+1.6
2,319,632	+		IAI47_10990	0.36	+0.4
2,319,632	+		IAI47_10990	0.36	+1.1
2,319,632	+		IAI47_10990	0.36	-0.6
2,319,633	-		IAI47_10990	0.36	+0.9
2,319,633	-		IAI47_10990	0.36	+1.7
2,319,633	-		IAI47_10990	0.36	+0.8
2,319,633	-		IAI47_10990	0.36	+0.6
2,319,641	+		IAI47_10990	0.38	+0.4
2,319,641	+		IAI47_10990	0.38	+0.0
2,319,641	+		IAI47_10990	0.38	-1.3
2,319,641	+		IAI47_10990	0.38	-0.6
2,319,641	+		IAI47_10990	0.38	+0.7
2,319,641	+		IAI47_10990	0.38	+0.8
2,319,641	+		IAI47_10990	0.38	+0.6
2,319,642	-		IAI47_10990	0.38	-0.0
2,319,642	-		IAI47_10990	0.38	+1.3
2,319,646	+		IAI47_10990	0.38	+0.5
2,319,646	+		IAI47_10990	0.38	+0.4
2,319,647	-		IAI47_10990	0.38	+1.2
2,319,647	-		IAI47_10990	0.38	+0.5
2,319,647	-		IAI47_10990	0.38	-0.9
2,319,647	-		IAI47_10990	0.38	-0.4
2,319,647	-		IAI47_10990	0.38	+1.7
2,319,647	-		IAI47_10990	0.38	-1.6
2,319,679	+		IAI47_10990	0.43	+2.4
2,319,737	+		IAI47_10990	0.50	+0.3
2,319,737	+		IAI47_10990	0.50	+0.4
2,319,782	+		IAI47_10990	0.56	-0.1
2,319,782	+		IAI47_10990	0.56	+0.6
2,319,782	+		IAI47_10990	0.56	+0.1
2,319,782	+		IAI47_10990	0.56	+0.4
2,319,788	+		IAI47_10990	0.57	-0.4
2,319,788	+		IAI47_10990	0.57	-0.4
2,319,788	+		IAI47_10990	0.57	+1.3
2,319,788	+		IAI47_10990	0.57	-0.7
2,319,788	+		IAI47_10990	0.57	-0.6
2,319,788	+		IAI47_10990	0.57	+0.3
2,319,789	-		IAI47_10990	0.57	-0.3
2,319,789	-		IAI47_10990	0.57	+0.4
2,319,789	-		IAI47_10990	0.57	-0.2
2,319,789	-		IAI47_10990	0.57	+1.6
2,319,789	-		IAI47_10990	0.57	+0.8
2,319,789	-		IAI47_10990	0.57	+2.2
2,319,789	-		IAI47_10990	0.57	+0.3
2,319,789	-		IAI47_10990	0.57	+0.6
2,319,795	+		IAI47_10990	0.58	+1.4
2,319,795	+		IAI47_10990	0.58	+0.4
2,319,795	+		IAI47_10990	0.58	+2.2
2,319,795	+		IAI47_10990	0.58	+1.2
2,319,796	-		IAI47_10990	0.58	+1.4
2,319,796	-		IAI47_10990	0.58	+0.4
2,319,796	-		IAI47_10990	0.58	+0.1
2,319,796	-		IAI47_10990	0.58	+0.4
2,319,796	-		IAI47_10990	0.58	+1.2
2,319,796	-		IAI47_10990	0.58	+4.4
2,319,796	-		IAI47_10990	0.58	+2.2
2,319,796	-		IAI47_10990	0.58	+1.3
2,319,796	-		IAI47_10990	0.58	+0.7
2,319,796	-		IAI47_10990	0.58	+1.0
2,319,803	+		IAI47_10990	0.59	+1.6
2,319,827	+		IAI47_10990	0.62	-0.6
2,319,827	+		IAI47_10990	0.62	-2.2
2,319,827	+		IAI47_10990	0.62	+0.5
2,319,828	-		IAI47_10990	0.62	-0.8
2,319,828	-		IAI47_10990	0.62	+0.8
2,319,861	+		IAI47_10990	0.66	+1.4
2,319,862	-		IAI47_10990	0.67	+1.2
2,319,862	-		IAI47_10990	0.67	+1.3
2,319,862	-		IAI47_10990	0.67	+0.5
2,319,864	+		IAI47_10990	0.67	+0.5
2,319,864	+		IAI47_10990	0.67	+0.4
2,319,865	-		IAI47_10990	0.67	-0.4
2,319,865	-		IAI47_10990	0.67	-1.2
2,319,865	-		IAI47_10990	0.67	+1.1
2,319,865	-		IAI47_10990	0.67	-0.1
2,319,865	-		IAI47_10990	0.67	+0.1
2,319,865	-		IAI47_10990	0.67	+1.7
2,319,865	-		IAI47_10990	0.67	+1.4
2,319,865	-		IAI47_10990	0.67	+0.2
2,319,887	+		IAI47_10990	0.70	-0.8
2,319,887	+		IAI47_10990	0.70	+0.4
2,319,887	+		IAI47_10990	0.70	+1.7
2,319,888	-		IAI47_10990	0.70	+0.7
2,319,888	-		IAI47_10990	0.70	+0.3
2,319,888	-		IAI47_10990	0.70	+1.1
2,319,894	+		IAI47_10990	0.71	-0.5
2,319,894	+		IAI47_10990	0.71	+1.7
2,319,894	+		IAI47_10990	0.71	-0.5
2,319,894	+		IAI47_10990	0.71	+1.0
2,319,894	+		IAI47_10990	0.71	-0.9
2,319,894	+		IAI47_10990	0.71	+0.2
2,319,895	-		IAI47_10990	0.71	+1.4
2,319,895	-		IAI47_10990	0.71	+1.6
2,319,895	-		IAI47_10990	0.71	+2.4
2,319,895	-		IAI47_10990	0.71	-0.8
2,319,895	-		IAI47_10990	0.71	+0.1
2,319,895	-		IAI47_10990	0.71	-0.9
2,319,895	-		IAI47_10990	0.71	+0.8
2,319,904	+		IAI47_10990	0.72	-0.2
2,319,905	+		IAI47_10990	0.72	-0.0
2,319,905	+		IAI47_10990	0.72	+1.5
2,319,906	-		IAI47_10990	0.72	+0.2
2,319,906	-		IAI47_10990	0.72	-0.4
2,319,906	-		IAI47_10990	0.72	+0.8
2,319,915	+		IAI47_10990	0.73	-1.4
2,319,915	+		IAI47_10990	0.73	+0.7
2,319,915	+		IAI47_10990	0.73	-0.3
2,319,915	+		IAI47_10990	0.73	-0.5
2,319,915	+		IAI47_10990	0.73	+0.5
2,319,915	+		IAI47_10990	0.73	-0.3
2,319,915	+		IAI47_10990	0.73	-0.1
2,319,915	+		IAI47_10990	0.73	-0.7
2,319,915	+		IAI47_10990	0.73	-1.1
2,319,916	-		IAI47_10990	0.74	+1.3
2,319,916	-		IAI47_10990	0.74	+2.2
2,319,916	-		IAI47_10990	0.74	+1.4
2,319,916	-		IAI47_10990	0.74	+1.3
2,319,916	-		IAI47_10990	0.74	-0.1
2,319,968	+		IAI47_10990	0.80	-1.9
2,319,968	+		IAI47_10990	0.80	+0.2
2,319,969	-		IAI47_10990	0.81	+1.6
2,319,969	-		IAI47_10990	0.81	+0.7
2,319,969	-		IAI47_10990	0.81	-0.0
2,320,008	+		IAI47_10990	0.86	+1.3
2,320,008	+		IAI47_10990	0.86	+0.7
2,320,009	-		IAI47_10990	0.86	+4.3
2,320,029	+		IAI47_10990	0.88	+1.3
2,320,029	+		IAI47_10990	0.88	+1.0
2,320,029	+		IAI47_10990	0.88	+0.7
2,320,030	-		IAI47_10990	0.89	+0.6
2,320,030	-		IAI47_10990	0.89	+0.4
2,320,030	-		IAI47_10990	0.89	-0.2
2,320,033	+		IAI47_10990	0.89	+1.2
2,320,034	-		IAI47_10990	0.89	-1.4
2,320,104	+				-2.4
2,320,105	-				+0.8
2,320,106	+				+0.9
2,320,106	+				+0.1
2,320,107	-				+1.4
2,320,107	-				-1.3
2,320,107	-				+0.4
2,320,107	-				+0.5
2,320,107	-				-0.6