Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_571 and HP15_572 are separated by 11 nucleotides HP15_572 and HP15_573 are separated by 90 nucleotides HP15_573 and HP15_574 overlap by 4 nucleotides HP15_574 and HP15_575 are separated by 184 nucleotides
HP15_571: HP15_571 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 592,216 to 593,130
_571
HP15_572: HP15_572 - protein containing DUF721, at 593,142 to 593,588
_572
HP15_573: HP15_573 - hypothetical protein, at 593,679 to 593,807
_573
HP15_574: HP15_574 - peptidase M23B, at 593,804 to 594,757
_574
HP15_575: HP15_575 - preprotein translocase, SecA subunit, at 594,942 to 597,680
_575
Position (kb) 593
594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 593.140 kb on + strand at 593.658 kb on + strand at 593.722 kb on + strand, within HP15_573 at 593.840 kb on + strand at 594.093 kb on + strand, within HP15_574 at 594.104 kb on + strand, within HP15_574 at 594.233 kb on + strand, within HP15_574 at 594.405 kb on + strand, within HP15_574 at 594.514 kb on - strand, within HP15_574 at 594.606 kb on + strand, within HP15_574 at 594.660 kb on + strand, within HP15_574 at 594.815 kb on + strand at 594.846 kb on - strand at 594.882 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 593,140 + -0.4 593,658 + -0.6 593,722 + HP15_573 0.33 -1.0 593,840 + -2.8 594,093 + HP15_574 0.30 -3.0 594,104 + HP15_574 0.31 -3.1 594,233 + HP15_574 0.45 -2.6 594,405 + HP15_574 0.63 -2.4 594,514 - HP15_574 0.74 -1.2 594,606 + HP15_574 0.84 -2.1 594,660 + HP15_574 0.90 -1.2 594,815 + -0.3 594,846 - +1.1 594,882 - -1.6
Or see this region's nucleotide sequence