Strain Fitness in Marinobacter adhaerens HP15 around HP15_4156

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4154 and HP15_4155 overlap by 23 nucleotidesHP15_4155 and HP15_4156 are separated by 92 nucleotidesHP15_4156 and HP15_4157 are separated by 158 nucleotidesHP15_4157 and HP15_4158 are separated by 189 nucleotides HP15_4154: HP15_4154 - glycosyl transferase family protein, at 4,390,712 to 4,391,338 _4154 HP15_4155: HP15_4155 - hypothetical protein, at 4,391,316 to 4,391,984 _4155 HP15_4156: HP15_4156 - conserved hypothetical protein, at 4,392,077 to 4,392,934 _4156 HP15_4157: HP15_4157 - conserved hypothetical protein, at 4,393,093 to 4,393,446 _4157 HP15_4158: HP15_4158 - hypothetical protein, at 4,393,636 to 4,394,268 _4158 Position (kb) 4392 4393Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 4391.219 kb on - strand, within HP15_4154at 4391.288 kb on - strandat 4391.288 kb on - strandat 4391.305 kb on - strandat 4391.314 kb on + strandat 4391.323 kb on - strandat 4391.411 kb on + strand, within HP15_4155at 4391.679 kb on - strand, within HP15_4155at 4391.696 kb on - strand, within HP15_4155at 4391.755 kb on - strand, within HP15_4155at 4391.847 kb on - strand, within HP15_4155at 4391.851 kb on + strand, within HP15_4155at 4391.859 kb on - strand, within HP15_4155at 4391.923 kb on + strandat 4392.047 kb on - strandat 4392.172 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.316 kb on - strand, within HP15_4156at 4392.368 kb on + strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.376 kb on - strand, within HP15_4156at 4392.391 kb on - strand, within HP15_4156at 4392.445 kb on + strand, within HP15_4156at 4392.452 kb on + strand, within HP15_4156at 4392.453 kb on + strand, within HP15_4156at 4392.475 kb on + strand, within HP15_4156at 4392.480 kb on - strand, within HP15_4156at 4392.518 kb on + strand, within HP15_4156at 4392.548 kb on + strand, within HP15_4156at 4392.595 kb on + strand, within HP15_4156at 4392.601 kb on - strand, within HP15_4156at 4392.659 kb on - strand, within HP15_4156at 4392.684 kb on - strand, within HP15_4156at 4392.745 kb on + strand, within HP15_4156at 4392.745 kb on + strand, within HP15_4156at 4392.817 kb on - strand, within HP15_4156at 4392.827 kb on + strand, within HP15_4156at 4392.893 kb on + strandat 4392.916 kb on + strandat 4392.916 kb on + strandat 4392.921 kb on + strandat 4392.924 kb on - strandat 4392.924 kb on - strandat 4392.926 kb on + strandat 4392.994 kb on - strandat 4392.999 kb on - strandat 4393.034 kb on + strandat 4393.143 kb on + strand, within HP15_4157at 4393.151 kb on - strand, within HP15_4157at 4393.178 kb on - strand, within HP15_4157at 4393.181 kb on + strand, within HP15_4157at 4393.211 kb on + strand, within HP15_4157at 4393.237 kb on + strand, within HP15_4157at 4393.293 kb on + strand, within HP15_4157at 4393.294 kb on + strand, within HP15_4157at 4393.312 kb on - strand, within HP15_4157at 4393.332 kb on - strand, within HP15_4157at 4393.339 kb on - strand, within HP15_4157at 4393.356 kb on + strand, within HP15_4157at 4393.389 kb on - strand, within HP15_4157at 4393.396 kb on - strand, within HP15_4157at 4393.440 kb on + strandat 4393.440 kb on + strandat 4393.454 kb on + strandat 4393.456 kb on + strandat 4393.485 kb on - strandat 4393.488 kb on + strandat 4393.588 kb on - strandat 4393.737 kb on + strand, within HP15_4158at 4393.737 kb on + strand, within HP15_4158at 4393.745 kb on - strand, within HP15_4158at 4393.745 kb on - strand, within HP15_4158at 4393.745 kb on - strand, within HP15_4158at 4393.799 kb on - strand, within HP15_4158at 4393.808 kb on - strand, within HP15_4158at 4393.811 kb on - strand, within HP15_4158at 4393.854 kb on + strand, within HP15_4158at 4393.862 kb on - strand, within HP15_4158at 4393.862 kb on - strand, within HP15_4158at 4393.904 kb on + strand, within HP15_4158at 4393.906 kb on - strand, within HP15_4158

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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4,391,219 - HP15_4154 0.81 +1.3
4,391,288 - -0.3
4,391,288 - +0.1
4,391,305 - +0.6
4,391,314 + -0.1
4,391,323 - -0.0
4,391,411 + HP15_4155 0.14 -1.4
4,391,679 - HP15_4155 0.54 +0.2
4,391,696 - HP15_4155 0.57 -1.1
4,391,755 - HP15_4155 0.66 -0.5
4,391,847 - HP15_4155 0.79 -0.3
4,391,851 + HP15_4155 0.80 +1.4
4,391,859 - HP15_4155 0.81 +0.1
4,391,923 + -2.1
4,392,047 - -1.8
4,392,172 - HP15_4156 0.11 +0.5
4,392,316 - HP15_4156 0.28 +1.3
4,392,316 - HP15_4156 0.28 -1.0
4,392,316 - HP15_4156 0.28 +0.7
4,392,368 + HP15_4156 0.34 -1.0
4,392,376 - HP15_4156 0.35 +0.1
4,392,376 - HP15_4156 0.35 +0.6
4,392,376 - HP15_4156 0.35 -1.2
4,392,376 - HP15_4156 0.35 +0.1
4,392,391 - HP15_4156 0.37 +0.2
4,392,445 + HP15_4156 0.43 +1.0
4,392,452 + HP15_4156 0.44 -2.8
4,392,453 + HP15_4156 0.44 -1.8
4,392,475 + HP15_4156 0.46 +0.6
4,392,480 - HP15_4156 0.47 +1.3
4,392,518 + HP15_4156 0.51 +0.1
4,392,548 + HP15_4156 0.55 -0.2
4,392,595 + HP15_4156 0.60 -0.3
4,392,601 - HP15_4156 0.61 +0.8
4,392,659 - HP15_4156 0.68 +1.0
4,392,684 - HP15_4156 0.71 +0.9
4,392,745 + HP15_4156 0.78 -0.7
4,392,745 + HP15_4156 0.78 -0.6
4,392,817 - HP15_4156 0.86 +5.9
4,392,827 + HP15_4156 0.87 -1.8
4,392,893 + -0.5
4,392,916 + +0.1
4,392,916 + +1.6
4,392,921 + +0.1
4,392,924 - -0.2
4,392,924 - -2.4
4,392,926 + -0.4
4,392,994 - -1.3
4,392,999 - +0.5
4,393,034 + -0.3
4,393,143 + HP15_4157 0.14 -0.9
4,393,151 - HP15_4157 0.16 -1.2
4,393,178 - HP15_4157 0.24 +0.9
4,393,181 + HP15_4157 0.25 -0.2
4,393,211 + HP15_4157 0.33 +2.1
4,393,237 + HP15_4157 0.41 -1.2
4,393,293 + HP15_4157 0.56 -0.4
4,393,294 + HP15_4157 0.57 +0.3
4,393,312 - HP15_4157 0.62 +0.0
4,393,332 - HP15_4157 0.68 -0.6
4,393,339 - HP15_4157 0.69 +0.4
4,393,356 + HP15_4157 0.74 +0.5
4,393,389 - HP15_4157 0.84 +0.3
4,393,396 - HP15_4157 0.86 +0.1
4,393,440 + +0.6
4,393,440 + +0.4
4,393,454 + +0.6
4,393,456 + -0.2
4,393,485 - +0.1
4,393,488 + +1.0
4,393,588 - -0.4
4,393,737 + HP15_4158 0.16 -0.7
4,393,737 + HP15_4158 0.16 -0.1
4,393,745 - HP15_4158 0.17 -0.7
4,393,745 - HP15_4158 0.17 -1.1
4,393,745 - HP15_4158 0.17 -0.0
4,393,799 - HP15_4158 0.26 +0.2
4,393,808 - HP15_4158 0.27 -2.0
4,393,811 - HP15_4158 0.28 -2.0
4,393,854 + HP15_4158 0.34 -0.3
4,393,862 - HP15_4158 0.36 +0.6
4,393,862 - HP15_4158 0.36 -1.9
4,393,904 + HP15_4158 0.42 +0.0
4,393,906 - HP15_4158 0.43 -1.4

Or see this region's nucleotide sequence