Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_4154 and HP15_4155 overlap by 23 nucleotides HP15_4155 and HP15_4156 are separated by 92 nucleotides HP15_4156 and HP15_4157 are separated by 158 nucleotides HP15_4157 and HP15_4158 are separated by 189 nucleotides
HP15_4154: HP15_4154 - glycosyl transferase family protein, at 4,390,712 to 4,391,338
_4154
HP15_4155: HP15_4155 - hypothetical protein, at 4,391,316 to 4,391,984
_4155
HP15_4156: HP15_4156 - conserved hypothetical protein, at 4,392,077 to 4,392,934
_4156
HP15_4157: HP15_4157 - conserved hypothetical protein, at 4,393,093 to 4,393,446
_4157
HP15_4158: HP15_4158 - hypothetical protein, at 4,393,636 to 4,394,268
_4158
Position (kb)
4392
4393 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 4391.219 kb on - strand, within HP15_4154 at 4391.288 kb on - strand at 4391.288 kb on - strand at 4391.305 kb on - strand at 4391.314 kb on + strand at 4391.323 kb on - strand at 4391.411 kb on + strand, within HP15_4155 at 4391.679 kb on - strand, within HP15_4155 at 4391.696 kb on - strand, within HP15_4155 at 4391.755 kb on - strand, within HP15_4155 at 4391.847 kb on - strand, within HP15_4155 at 4391.851 kb on + strand, within HP15_4155 at 4391.859 kb on - strand, within HP15_4155 at 4391.923 kb on + strand at 4392.047 kb on - strand at 4392.172 kb on - strand, within HP15_4156 at 4392.316 kb on - strand, within HP15_4156 at 4392.316 kb on - strand, within HP15_4156 at 4392.316 kb on - strand, within HP15_4156 at 4392.368 kb on + strand, within HP15_4156 at 4392.376 kb on - strand, within HP15_4156 at 4392.376 kb on - strand, within HP15_4156 at 4392.376 kb on - strand, within HP15_4156 at 4392.376 kb on - strand, within HP15_4156 at 4392.391 kb on - strand, within HP15_4156 at 4392.445 kb on + strand, within HP15_4156 at 4392.452 kb on + strand, within HP15_4156 at 4392.453 kb on + strand, within HP15_4156 at 4392.475 kb on + strand, within HP15_4156 at 4392.480 kb on - strand, within HP15_4156 at 4392.518 kb on + strand, within HP15_4156 at 4392.548 kb on + strand, within HP15_4156 at 4392.595 kb on + strand, within HP15_4156 at 4392.601 kb on - strand, within HP15_4156 at 4392.659 kb on - strand, within HP15_4156 at 4392.684 kb on - strand, within HP15_4156 at 4392.745 kb on + strand, within HP15_4156 at 4392.745 kb on + strand, within HP15_4156 at 4392.817 kb on - strand, within HP15_4156 at 4392.827 kb on + strand, within HP15_4156 at 4392.893 kb on + strand at 4392.916 kb on + strand at 4392.916 kb on + strand at 4392.921 kb on + strand at 4392.924 kb on - strand at 4392.924 kb on - strand at 4392.926 kb on + strand at 4392.994 kb on - strand at 4392.999 kb on - strand at 4393.034 kb on + strand at 4393.143 kb on + strand, within HP15_4157 at 4393.151 kb on - strand, within HP15_4157 at 4393.178 kb on - strand, within HP15_4157 at 4393.181 kb on + strand, within HP15_4157 at 4393.211 kb on + strand, within HP15_4157 at 4393.237 kb on + strand, within HP15_4157 at 4393.293 kb on + strand, within HP15_4157 at 4393.294 kb on + strand, within HP15_4157 at 4393.312 kb on - strand, within HP15_4157 at 4393.332 kb on - strand, within HP15_4157 at 4393.339 kb on - strand, within HP15_4157 at 4393.356 kb on + strand, within HP15_4157 at 4393.389 kb on - strand, within HP15_4157 at 4393.396 kb on - strand, within HP15_4157 at 4393.440 kb on + strand at 4393.440 kb on + strand at 4393.454 kb on + strand at 4393.456 kb on + strand at 4393.485 kb on - strand at 4393.488 kb on + strand at 4393.588 kb on - strand at 4393.737 kb on + strand, within HP15_4158 at 4393.737 kb on + strand, within HP15_4158 at 4393.745 kb on - strand, within HP15_4158 at 4393.745 kb on - strand, within HP15_4158 at 4393.745 kb on - strand, within HP15_4158 at 4393.799 kb on - strand, within HP15_4158 at 4393.808 kb on - strand, within HP15_4158 at 4393.811 kb on - strand, within HP15_4158 at 4393.854 kb on + strand, within HP15_4158 at 4393.862 kb on - strand, within HP15_4158 at 4393.862 kb on - strand, within HP15_4158 at 4393.904 kb on + strand, within HP15_4158 at 4393.906 kb on - strand, within HP15_4158
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,391,219 - HP15_4154 0.81 +1.3 4,391,288 - -0.3 4,391,288 - +0.1 4,391,305 - +0.6 4,391,314 + -0.1 4,391,323 - -0.0 4,391,411 + HP15_4155 0.14 -1.4 4,391,679 - HP15_4155 0.54 +0.2 4,391,696 - HP15_4155 0.57 -1.1 4,391,755 - HP15_4155 0.66 -0.5 4,391,847 - HP15_4155 0.79 -0.3 4,391,851 + HP15_4155 0.80 +1.4 4,391,859 - HP15_4155 0.81 +0.1 4,391,923 + -2.1 4,392,047 - -1.8 4,392,172 - HP15_4156 0.11 +0.5 4,392,316 - HP15_4156 0.28 +1.3 4,392,316 - HP15_4156 0.28 -1.0 4,392,316 - HP15_4156 0.28 +0.7 4,392,368 + HP15_4156 0.34 -1.0 4,392,376 - HP15_4156 0.35 +0.1 4,392,376 - HP15_4156 0.35 +0.6 4,392,376 - HP15_4156 0.35 -1.2 4,392,376 - HP15_4156 0.35 +0.1 4,392,391 - HP15_4156 0.37 +0.2 4,392,445 + HP15_4156 0.43 +1.0 4,392,452 + HP15_4156 0.44 -2.8 4,392,453 + HP15_4156 0.44 -1.8 4,392,475 + HP15_4156 0.46 +0.6 4,392,480 - HP15_4156 0.47 +1.3 4,392,518 + HP15_4156 0.51 +0.1 4,392,548 + HP15_4156 0.55 -0.2 4,392,595 + HP15_4156 0.60 -0.3 4,392,601 - HP15_4156 0.61 +0.8 4,392,659 - HP15_4156 0.68 +1.0 4,392,684 - HP15_4156 0.71 +0.9 4,392,745 + HP15_4156 0.78 -0.7 4,392,745 + HP15_4156 0.78 -0.6 4,392,817 - HP15_4156 0.86 +5.9 4,392,827 + HP15_4156 0.87 -1.8 4,392,893 + -0.5 4,392,916 + +0.1 4,392,916 + +1.6 4,392,921 + +0.1 4,392,924 - -0.2 4,392,924 - -2.4 4,392,926 + -0.4 4,392,994 - -1.3 4,392,999 - +0.5 4,393,034 + -0.3 4,393,143 + HP15_4157 0.14 -0.9 4,393,151 - HP15_4157 0.16 -1.2 4,393,178 - HP15_4157 0.24 +0.9 4,393,181 + HP15_4157 0.25 -0.2 4,393,211 + HP15_4157 0.33 +2.1 4,393,237 + HP15_4157 0.41 -1.2 4,393,293 + HP15_4157 0.56 -0.4 4,393,294 + HP15_4157 0.57 +0.3 4,393,312 - HP15_4157 0.62 +0.0 4,393,332 - HP15_4157 0.68 -0.6 4,393,339 - HP15_4157 0.69 +0.4 4,393,356 + HP15_4157 0.74 +0.5 4,393,389 - HP15_4157 0.84 +0.3 4,393,396 - HP15_4157 0.86 +0.1 4,393,440 + +0.6 4,393,440 + +0.4 4,393,454 + +0.6 4,393,456 + -0.2 4,393,485 - +0.1 4,393,488 + +1.0 4,393,588 - -0.4 4,393,737 + HP15_4158 0.16 -0.7 4,393,737 + HP15_4158 0.16 -0.1 4,393,745 - HP15_4158 0.17 -0.7 4,393,745 - HP15_4158 0.17 -1.1 4,393,745 - HP15_4158 0.17 -0.0 4,393,799 - HP15_4158 0.26 +0.2 4,393,808 - HP15_4158 0.27 -2.0 4,393,811 - HP15_4158 0.28 -2.0 4,393,854 + HP15_4158 0.34 -0.3 4,393,862 - HP15_4158 0.36 +0.6 4,393,862 - HP15_4158 0.36 -1.9 4,393,904 + HP15_4158 0.42 +0.0 4,393,906 - HP15_4158 0.43 -1.4
Or see this region's nucleotide sequence