Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3838 and HP15_3839 are separated by 114 nucleotides HP15_3839 and HP15_3840 are separated by 177 nucleotides HP15_3840 and HP15_3841 are separated by 147 nucleotides
HP15_3838: HP15_3838 - ankyrin-like protein, at 4,064,388 to 4,064,720
_3838
HP15_3839: HP15_3839 - YbhB and YbcL, at 4,064,835 to 4,065,458
_3839
HP15_3840: HP15_3840 - metallophosphoesterase, at 4,065,636 to 4,066,487
_3840
HP15_3841: HP15_3841 - iron(III) ABC transporter permease protein, at 4,066,635 to 4,068,347
_3841
Position (kb)
4065
4066
4067 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4064.667 kb on - strand, within HP15_3838 at 4064.773 kb on + strand at 4064.783 kb on + strand at 4064.783 kb on + strand at 4064.783 kb on + strand at 4064.811 kb on - strand at 4064.825 kb on + strand at 4064.873 kb on - strand at 4064.913 kb on - strand, within HP15_3839 at 4064.929 kb on + strand, within HP15_3839 at 4064.984 kb on - strand, within HP15_3839 at 4065.012 kb on - strand, within HP15_3839 at 4065.017 kb on - strand, within HP15_3839 at 4065.052 kb on + strand, within HP15_3839 at 4065.053 kb on - strand, within HP15_3839 at 4065.172 kb on - strand, within HP15_3839 at 4065.194 kb on - strand, within HP15_3839 at 4065.271 kb on + strand, within HP15_3839 at 4065.286 kb on + strand, within HP15_3839 at 4065.294 kb on - strand, within HP15_3839 at 4065.343 kb on + strand, within HP15_3839 at 4065.343 kb on + strand, within HP15_3839 at 4065.351 kb on - strand, within HP15_3839 at 4065.351 kb on - strand, within HP15_3839 at 4065.410 kb on - strand at 4065.419 kb on + strand at 4065.427 kb on - strand at 4065.444 kb on - strand at 4065.461 kb on + strand at 4065.478 kb on + strand at 4065.545 kb on + strand at 4065.555 kb on - strand at 4065.555 kb on - strand at 4065.555 kb on - strand at 4065.863 kb on - strand, within HP15_3840 at 4065.922 kb on + strand, within HP15_3840 at 4065.942 kb on + strand, within HP15_3840 at 4065.950 kb on - strand, within HP15_3840 at 4065.955 kb on + strand, within HP15_3840 at 4065.980 kb on + strand, within HP15_3840 at 4066.105 kb on - strand, within HP15_3840 at 4066.147 kb on - strand, within HP15_3840 at 4066.188 kb on + strand, within HP15_3840 at 4066.198 kb on - strand, within HP15_3840 at 4066.221 kb on + strand, within HP15_3840 at 4066.242 kb on - strand, within HP15_3840 at 4066.297 kb on + strand, within HP15_3840 at 4066.305 kb on - strand, within HP15_3840 at 4066.382 kb on - strand, within HP15_3840 at 4066.420 kb on - strand at 4066.435 kb on + strand at 4066.448 kb on - strand at 4066.453 kb on - strand at 4066.486 kb on + strand at 4066.486 kb on + strand at 4066.494 kb on - strand at 4066.494 kb on - strand at 4066.494 kb on - strand at 4066.561 kb on - strand at 4066.595 kb on + strand at 4066.603 kb on - strand at 4066.603 kb on - strand at 4066.603 kb on - strand at 4066.704 kb on - strand at 4066.861 kb on + strand, within HP15_3841 at 4066.899 kb on + strand, within HP15_3841 at 4066.914 kb on + strand, within HP15_3841 at 4066.992 kb on + strand, within HP15_3841 at 4067.077 kb on + strand, within HP15_3841 at 4067.133 kb on - strand, within HP15_3841 at 4067.151 kb on + strand, within HP15_3841 at 4067.161 kb on + strand, within HP15_3841 at 4067.161 kb on + strand, within HP15_3841 at 4067.333 kb on + strand, within HP15_3841 at 4067.343 kb on + strand, within HP15_3841 at 4067.356 kb on - strand, within HP15_3841 at 4067.364 kb on + strand, within HP15_3841 at 4067.400 kb on - strand, within HP15_3841
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 4,064,667 - HP15_3838 0.84 -0.1 4,064,773 + +0.6 4,064,783 + +0.1 4,064,783 + +0.1 4,064,783 + -2.0 4,064,811 - +0.4 4,064,825 + +0.8 4,064,873 - +0.4 4,064,913 - HP15_3839 0.12 +0.3 4,064,929 + HP15_3839 0.15 -0.2 4,064,984 - HP15_3839 0.24 -0.4 4,065,012 - HP15_3839 0.28 -1.3 4,065,017 - HP15_3839 0.29 -1.1 4,065,052 + HP15_3839 0.35 +0.1 4,065,053 - HP15_3839 0.35 -1.4 4,065,172 - HP15_3839 0.54 +0.2 4,065,194 - HP15_3839 0.58 +0.0 4,065,271 + HP15_3839 0.70 +0.2 4,065,286 + HP15_3839 0.72 -0.9 4,065,294 - HP15_3839 0.74 -1.7 4,065,343 + HP15_3839 0.81 -0.1 4,065,343 + HP15_3839 0.81 +0.2 4,065,351 - HP15_3839 0.83 -1.6 4,065,351 - HP15_3839 0.83 +0.7 4,065,410 - -1.6 4,065,419 + +1.2 4,065,427 - -0.0 4,065,444 - -1.3 4,065,461 + +0.4 4,065,478 + +0.0 4,065,545 + +0.1 4,065,555 - -0.6 4,065,555 - +0.4 4,065,555 - -0.1 4,065,863 - HP15_3840 0.27 +1.7 4,065,922 + HP15_3840 0.34 -0.8 4,065,942 + HP15_3840 0.36 +0.1 4,065,950 - HP15_3840 0.37 +0.9 4,065,955 + HP15_3840 0.37 +0.1 4,065,980 + HP15_3840 0.40 +1.2 4,066,105 - HP15_3840 0.55 -0.1 4,066,147 - HP15_3840 0.60 +0.9 4,066,188 + HP15_3840 0.65 -2.7 4,066,198 - HP15_3840 0.66 +1.7 4,066,221 + HP15_3840 0.69 -0.5 4,066,242 - HP15_3840 0.71 +0.9 4,066,297 + HP15_3840 0.78 +0.3 4,066,305 - HP15_3840 0.79 +1.4 4,066,382 - HP15_3840 0.88 -0.3 4,066,420 - +1.4 4,066,435 + -0.2 4,066,448 - -0.6 4,066,453 - -0.4 4,066,486 + -1.3 4,066,486 + +0.1 4,066,494 - +0.6 4,066,494 - +0.3 4,066,494 - -1.7 4,066,561 - -2.4 4,066,595 + +0.3 4,066,603 - -0.2 4,066,603 - +1.1 4,066,603 - +0.3 4,066,704 - +0.7 4,066,861 + HP15_3841 0.13 +2.6 4,066,899 + HP15_3841 0.15 +3.7 4,066,914 + HP15_3841 0.16 -0.2 4,066,992 + HP15_3841 0.21 +0.7 4,067,077 + HP15_3841 0.26 +0.5 4,067,133 - HP15_3841 0.29 +0.2 4,067,151 + HP15_3841 0.30 -0.5 4,067,161 + HP15_3841 0.31 +1.5 4,067,161 + HP15_3841 0.31 +0.4 4,067,333 + HP15_3841 0.41 -3.1 4,067,343 + HP15_3841 0.41 +0.9 4,067,356 - HP15_3841 0.42 +1.1 4,067,364 + HP15_3841 0.43 +0.1 4,067,400 - HP15_3841 0.45 -0.3
Or see this region's nucleotide sequence