Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3608 and HP15_3609 are separated by 40 nucleotides HP15_3609 and HP15_3610 are separated by 69 nucleotides HP15_3610 and HP15_3611 are separated by 290 nucleotides
HP15_3608: HP15_3608 - membrane protein containing redoxin domain, at 3,804,441 to 3,805,256
_3608
HP15_3609: HP15_3609 - secreted protein containing DUF302, at 3,805,297 to 3,805,752
_3609
HP15_3610: HP15_3610 - lipid A biosynthesis lauroyl acyltransferase, at 3,805,822 to 3,806,640
_3610
HP15_3611: HP15_3611 - transglycosylase, Slt family protein, at 3,806,931 to 3,808,301
_3611
Position (kb)
3805
3806
3807 Strain fitness (log2 ratio)
-2
-1
0
1 at 3804.822 kb on - strand, within HP15_3608 at 3804.822 kb on - strand, within HP15_3608 at 3804.822 kb on - strand, within HP15_3608 at 3804.822 kb on - strand, within HP15_3608 at 3804.822 kb on - strand, within HP15_3608 at 3804.822 kb on - strand, within HP15_3608 at 3804.869 kb on + strand, within HP15_3608 at 3804.874 kb on + strand, within HP15_3608 at 3804.882 kb on + strand, within HP15_3608 at 3804.929 kb on + strand, within HP15_3608 at 3804.959 kb on - strand, within HP15_3608 at 3804.992 kb on - strand, within HP15_3608 at 3805.026 kb on - strand, within HP15_3608 at 3805.045 kb on - strand, within HP15_3608 at 3805.172 kb on - strand, within HP15_3608 at 3805.202 kb on + strand at 3805.217 kb on + strand at 3805.220 kb on - strand at 3805.253 kb on - strand at 3805.261 kb on + strand at 3805.363 kb on + strand, within HP15_3609 at 3805.420 kb on - strand, within HP15_3609 at 3805.461 kb on + strand, within HP15_3609 at 3805.469 kb on - strand, within HP15_3609 at 3805.505 kb on + strand, within HP15_3609 at 3805.645 kb on - strand, within HP15_3609 at 3805.713 kb on - strand at 3805.785 kb on + strand at 3805.790 kb on + strand at 3805.790 kb on + strand at 3805.818 kb on - strand at 3805.825 kb on + strand at 3805.833 kb on - strand at 3805.833 kb on - strand at 3806.067 kb on + strand, within HP15_3610 at 3806.149 kb on + strand, within HP15_3610 at 3806.152 kb on - strand, within HP15_3610 at 3806.188 kb on + strand, within HP15_3610 at 3806.191 kb on - strand, within HP15_3610 at 3806.196 kb on - strand, within HP15_3610 at 3806.387 kb on + strand, within HP15_3610 at 3806.402 kb on + strand, within HP15_3610 at 3806.403 kb on - strand, within HP15_3610 at 3806.404 kb on + strand, within HP15_3610 at 3806.405 kb on - strand, within HP15_3610 at 3806.460 kb on - strand, within HP15_3610 at 3806.545 kb on + strand, within HP15_3610 at 3806.636 kb on - strand at 3806.894 kb on - strand at 3807.037 kb on - strand at 3807.129 kb on - strand, within HP15_3611 at 3807.145 kb on - strand, within HP15_3611 at 3807.242 kb on - strand, within HP15_3611 at 3807.299 kb on - strand, within HP15_3611 at 3807.360 kb on + strand, within HP15_3611 at 3807.475 kb on + strand, within HP15_3611 at 3807.518 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.592 kb on + strand, within HP15_3611 at 3807.600 kb on - strand, within HP15_3611 at 3807.600 kb on - strand, within HP15_3611
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,804,822 - HP15_3608 0.47 +0.4 3,804,822 - HP15_3608 0.47 +0.1 3,804,822 - HP15_3608 0.47 -0.2 3,804,822 - HP15_3608 0.47 -2.3 3,804,822 - HP15_3608 0.47 +1.1 3,804,822 - HP15_3608 0.47 -0.4 3,804,869 + HP15_3608 0.52 +0.3 3,804,874 + HP15_3608 0.53 -0.5 3,804,882 + HP15_3608 0.54 +0.7 3,804,929 + HP15_3608 0.60 +0.2 3,804,959 - HP15_3608 0.63 +0.8 3,804,992 - HP15_3608 0.68 -0.6 3,805,026 - HP15_3608 0.72 -1.2 3,805,045 - HP15_3608 0.74 -0.7 3,805,172 - HP15_3608 0.90 +0.6 3,805,202 + +0.1 3,805,217 + -0.6 3,805,220 - -2.0 3,805,253 - -2.2 3,805,261 + +0.5 3,805,363 + HP15_3609 0.14 -0.1 3,805,420 - HP15_3609 0.27 -0.1 3,805,461 + HP15_3609 0.36 -2.3 3,805,469 - HP15_3609 0.38 -1.9 3,805,505 + HP15_3609 0.46 +0.1 3,805,645 - HP15_3609 0.76 -2.0 3,805,713 - -0.2 3,805,785 + -1.3 3,805,790 + +1.0 3,805,790 + -1.3 3,805,818 - +0.1 3,805,825 + +0.3 3,805,833 - +1.5 3,805,833 - -1.6 3,806,067 + HP15_3610 0.30 +0.7 3,806,149 + HP15_3610 0.40 +0.7 3,806,152 - HP15_3610 0.40 +0.2 3,806,188 + HP15_3610 0.45 -0.9 3,806,191 - HP15_3610 0.45 -0.0 3,806,196 - HP15_3610 0.46 +0.5 3,806,387 + HP15_3610 0.69 -2.4 3,806,402 + HP15_3610 0.71 +0.4 3,806,403 - HP15_3610 0.71 -0.7 3,806,404 + HP15_3610 0.71 +1.6 3,806,405 - HP15_3610 0.71 +0.2 3,806,460 - HP15_3610 0.78 -0.9 3,806,545 + HP15_3610 0.88 +0.9 3,806,636 - -0.8 3,806,894 - +0.5 3,807,037 - +0.8 3,807,129 - HP15_3611 0.14 +1.0 3,807,145 - HP15_3611 0.16 +0.3 3,807,242 - HP15_3611 0.23 +0.0 3,807,299 - HP15_3611 0.27 -1.0 3,807,360 + HP15_3611 0.31 +1.7 3,807,475 + HP15_3611 0.40 +0.2 3,807,518 + HP15_3611 0.43 -0.3 3,807,592 + HP15_3611 0.48 -0.1 3,807,592 + HP15_3611 0.48 -0.4 3,807,592 + HP15_3611 0.48 +0.7 3,807,600 - HP15_3611 0.49 +0.0 3,807,600 - HP15_3611 0.49 -2.2
Or see this region's nucleotide sequence