Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_338 and HP15_339 overlap by 4 nucleotides HP15_339 and HP15_340 are separated by 59 nucleotides
HP15_338: HP15_338 - penicillin-binding protein 1B, at 333,669 to 335,909
_338
HP15_339: HP15_339 - conserved hypothetical protein, secreted, at 335,906 to 336,502
_339
HP15_340: HP15_340 - lipoprotein, at 336,562 to 337,497
_340
Position (kb) 335
336
337 Strain fitness (log2 ratio) -2
-1
0
1
2 at 335.043 kb on + strand, within HP15_338 at 335.046 kb on - strand, within HP15_338 at 335.102 kb on - strand, within HP15_338 at 335.168 kb on + strand, within HP15_338 at 335.201 kb on + strand, within HP15_338 at 335.379 kb on + strand, within HP15_338 at 335.416 kb on + strand, within HP15_338 at 335.494 kb on + strand, within HP15_338 at 335.516 kb on - strand, within HP15_338 at 335.518 kb on - strand, within HP15_338 at 335.518 kb on - strand, within HP15_338 at 335.518 kb on - strand, within HP15_338 at 335.518 kb on - strand, within HP15_338 at 335.529 kb on - strand, within HP15_338 at 335.531 kb on + strand, within HP15_338 at 335.576 kb on + strand, within HP15_338 at 335.576 kb on - strand, within HP15_338 at 335.615 kb on + strand, within HP15_338 at 335.623 kb on - strand, within HP15_338 at 335.782 kb on + strand at 335.784 kb on + strand at 335.803 kb on + strand at 335.928 kb on + strand at 335.936 kb on - strand at 335.941 kb on - strand at 336.161 kb on - strand, within HP15_339 at 336.196 kb on + strand, within HP15_339 at 336.414 kb on - strand, within HP15_339 at 336.454 kb on - strand at 336.465 kb on + strand at 336.528 kb on + strand at 336.548 kb on + strand at 336.552 kb on + strand at 336.612 kb on + strand at 336.612 kb on + strand at 336.620 kb on - strand at 336.727 kb on + strand, within HP15_340 at 336.732 kb on + strand, within HP15_340 at 336.801 kb on + strand, within HP15_340 at 336.809 kb on - strand, within HP15_340 at 336.810 kb on - strand, within HP15_340 at 336.817 kb on + strand, within HP15_340 at 336.848 kb on + strand, within HP15_340 at 336.933 kb on + strand, within HP15_340 at 336.986 kb on + strand, within HP15_340 at 336.994 kb on - strand, within HP15_340 at 336.994 kb on - strand, within HP15_340 at 336.994 kb on - strand, within HP15_340 at 337.020 kb on + strand, within HP15_340 at 337.020 kb on + strand, within HP15_340 at 337.020 kb on + strand, within HP15_340 at 337.020 kb on + strand, within HP15_340 at 337.028 kb on - strand, within HP15_340 at 337.063 kb on - strand, within HP15_340 at 337.242 kb on - strand, within HP15_340 at 337.277 kb on - strand, within HP15_340 at 337.351 kb on + strand, within HP15_340 at 337.351 kb on + strand, within HP15_340 at 337.402 kb on - strand, within HP15_340 at 337.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 335,043 + HP15_338 0.61 +0.8 335,046 - HP15_338 0.61 +2.1 335,102 - HP15_338 0.64 +0.1 335,168 + HP15_338 0.67 +1.2 335,201 + HP15_338 0.68 +1.2 335,379 + HP15_338 0.76 -0.7 335,416 + HP15_338 0.78 +0.2 335,494 + HP15_338 0.81 +1.5 335,516 - HP15_338 0.82 +1.6 335,518 - HP15_338 0.83 -0.5 335,518 - HP15_338 0.83 +1.0 335,518 - HP15_338 0.83 -0.1 335,518 - HP15_338 0.83 +1.7 335,529 - HP15_338 0.83 -1.0 335,531 + HP15_338 0.83 -0.5 335,576 + HP15_338 0.85 -0.6 335,576 - HP15_338 0.85 +1.2 335,615 + HP15_338 0.87 +0.2 335,623 - HP15_338 0.87 -1.0 335,782 + +1.2 335,784 + -0.9 335,803 + +1.5 335,928 + -0.7 335,936 - +2.0 335,941 - +1.8 336,161 - HP15_339 0.43 +1.4 336,196 + HP15_339 0.49 +1.2 336,414 - HP15_339 0.85 +1.5 336,454 - -1.4 336,465 + +0.1 336,528 + -0.9 336,548 + -0.4 336,552 + -2.4 336,612 + +0.7 336,612 + -1.7 336,620 - -0.3 336,727 + HP15_340 0.18 +0.4 336,732 + HP15_340 0.18 -0.5 336,801 + HP15_340 0.26 -0.4 336,809 - HP15_340 0.26 +0.8 336,810 - HP15_340 0.26 +1.2 336,817 + HP15_340 0.27 +1.4 336,848 + HP15_340 0.31 +0.5 336,933 + HP15_340 0.40 +0.6 336,986 + HP15_340 0.45 +0.2 336,994 - HP15_340 0.46 +1.9 336,994 - HP15_340 0.46 +0.5 336,994 - HP15_340 0.46 +1.7 337,020 + HP15_340 0.49 +0.8 337,020 + HP15_340 0.49 -2.1 337,020 + HP15_340 0.49 -0.3 337,020 + HP15_340 0.49 -2.2 337,028 - HP15_340 0.50 +0.1 337,063 - HP15_340 0.54 +0.3 337,242 - HP15_340 0.73 -0.9 337,277 - HP15_340 0.76 +0.4 337,351 + HP15_340 0.84 +0.5 337,351 + HP15_340 0.84 +0.1 337,402 - HP15_340 0.90 -1.6 337,436 + +1.0
Or see this region's nucleotide sequence