Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3251 and HP15_3252 are separated by 63 nucleotides HP15_3252 and HP15_3253 are separated by 157 nucleotides HP15_3253 and HP15_3254 are separated by 244 nucleotides
HP15_3251: HP15_3251 - geranylgeranyl reductase, at 3,405,207 to 3,406,331
_3251
HP15_3252: HP15_3252 - alkaline phosphatase-like protein, at 3,406,395 to 3,408,119
_3252
HP15_3253: HP15_3253 - ferritin-like DNA-binding protein, at 3,408,277 to 3,408,750
_3253
HP15_3254: HP15_3254 - hypothetical protein, at 3,408,995 to 3,409,174
_3254
Position (kb)
3406
3407
3408
3409 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3405.498 kb on - strand, within HP15_3251 at 3405.565 kb on + strand, within HP15_3251 at 3405.615 kb on - strand, within HP15_3251 at 3405.627 kb on - strand, within HP15_3251 at 3405.652 kb on - strand, within HP15_3251 at 3405.751 kb on + strand, within HP15_3251 at 3405.800 kb on + strand, within HP15_3251 at 3405.802 kb on - strand, within HP15_3251 at 3405.848 kb on + strand, within HP15_3251 at 3405.877 kb on - strand, within HP15_3251 at 3405.924 kb on + strand, within HP15_3251 at 3405.924 kb on + strand, within HP15_3251 at 3405.937 kb on - strand, within HP15_3251 at 3405.959 kb on - strand, within HP15_3251 at 3405.973 kb on - strand, within HP15_3251 at 3406.032 kb on - strand, within HP15_3251 at 3406.128 kb on - strand, within HP15_3251 at 3406.218 kb on + strand, within HP15_3251 at 3406.227 kb on + strand at 3406.291 kb on - strand at 3406.428 kb on + strand at 3406.431 kb on - strand at 3406.436 kb on - strand at 3406.436 kb on - strand at 3406.469 kb on + strand at 3406.634 kb on - strand, within HP15_3252 at 3406.787 kb on + strand, within HP15_3252 at 3406.795 kb on - strand, within HP15_3252 at 3406.795 kb on - strand, within HP15_3252 at 3406.835 kb on + strand, within HP15_3252 at 3406.868 kb on + strand, within HP15_3252 at 3406.868 kb on + strand, within HP15_3252 at 3406.876 kb on - strand, within HP15_3252 at 3406.876 kb on - strand, within HP15_3252 at 3406.876 kb on - strand, within HP15_3252 at 3406.878 kb on + strand, within HP15_3252 at 3406.944 kb on - strand, within HP15_3252 at 3406.971 kb on + strand, within HP15_3252 at 3407.085 kb on + strand, within HP15_3252 at 3407.211 kb on + strand, within HP15_3252 at 3407.211 kb on + strand, within HP15_3252 at 3407.375 kb on + strand, within HP15_3252 at 3407.383 kb on - strand, within HP15_3252 at 3407.383 kb on - strand, within HP15_3252 at 3407.438 kb on - strand, within HP15_3252 at 3407.439 kb on - strand, within HP15_3252 at 3407.441 kb on + strand, within HP15_3252 at 3407.484 kb on - strand, within HP15_3252 at 3407.487 kb on + strand, within HP15_3252 at 3407.523 kb on + strand, within HP15_3252 at 3407.553 kb on - strand, within HP15_3252 at 3407.553 kb on - strand, within HP15_3252 at 3407.632 kb on - strand, within HP15_3252 at 3407.808 kb on + strand, within HP15_3252 at 3407.999 kb on + strand at 3408.066 kb on + strand at 3408.099 kb on - strand at 3408.103 kb on + strand at 3408.301 kb on + strand at 3408.337 kb on - strand, within HP15_3253 at 3408.348 kb on - strand, within HP15_3253 at 3408.371 kb on + strand, within HP15_3253 at 3409.006 kb on + strand at 3409.101 kb on + strand, within HP15_3254 at 3409.101 kb on + strand, within HP15_3254 at 3409.109 kb on - strand, within HP15_3254
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,405,498 - HP15_3251 0.26 +0.4 3,405,565 + HP15_3251 0.32 +0.7 3,405,615 - HP15_3251 0.36 -0.4 3,405,627 - HP15_3251 0.37 -0.2 3,405,652 - HP15_3251 0.40 -0.0 3,405,751 + HP15_3251 0.48 -0.4 3,405,800 + HP15_3251 0.53 -3.1 3,405,802 - HP15_3251 0.53 -3.2 3,405,848 + HP15_3251 0.57 +0.3 3,405,877 - HP15_3251 0.60 -1.2 3,405,924 + HP15_3251 0.64 +1.6 3,405,924 + HP15_3251 0.64 -0.5 3,405,937 - HP15_3251 0.65 +0.1 3,405,959 - HP15_3251 0.67 +1.0 3,405,973 - HP15_3251 0.68 +0.1 3,406,032 - HP15_3251 0.73 +1.4 3,406,128 - HP15_3251 0.82 -1.2 3,406,218 + HP15_3251 0.90 +0.1 3,406,227 + -0.3 3,406,291 - -1.9 3,406,428 + +0.2 3,406,431 - +0.0 3,406,436 - -0.1 3,406,436 - +1.1 3,406,469 + -0.1 3,406,634 - HP15_3252 0.14 -1.1 3,406,787 + HP15_3252 0.23 -0.0 3,406,795 - HP15_3252 0.23 -0.8 3,406,795 - HP15_3252 0.23 +0.1 3,406,835 + HP15_3252 0.26 +1.1 3,406,868 + HP15_3252 0.27 +0.3 3,406,868 + HP15_3252 0.27 +0.2 3,406,876 - HP15_3252 0.28 +0.2 3,406,876 - HP15_3252 0.28 +0.0 3,406,876 - HP15_3252 0.28 -1.2 3,406,878 + HP15_3252 0.28 -0.4 3,406,944 - HP15_3252 0.32 +0.6 3,406,971 + HP15_3252 0.33 +0.1 3,407,085 + HP15_3252 0.40 -0.6 3,407,211 + HP15_3252 0.47 -4.0 3,407,211 + HP15_3252 0.47 +0.5 3,407,375 + HP15_3252 0.57 +0.4 3,407,383 - HP15_3252 0.57 +0.4 3,407,383 - HP15_3252 0.57 -1.1 3,407,438 - HP15_3252 0.60 -2.6 3,407,439 - HP15_3252 0.61 +1.1 3,407,441 + HP15_3252 0.61 +0.5 3,407,484 - HP15_3252 0.63 +0.7 3,407,487 + HP15_3252 0.63 -0.1 3,407,523 + HP15_3252 0.65 +0.6 3,407,553 - HP15_3252 0.67 +0.3 3,407,553 - HP15_3252 0.67 +0.3 3,407,632 - HP15_3252 0.72 +0.5 3,407,808 + HP15_3252 0.82 +1.0 3,407,999 + -1.1 3,408,066 + +0.1 3,408,099 - -1.2 3,408,103 + -2.1 3,408,301 + -0.7 3,408,337 - HP15_3253 0.13 -0.3 3,408,348 - HP15_3253 0.15 -2.2 3,408,371 + HP15_3253 0.20 -1.4 3,409,006 + +0.2 3,409,101 + HP15_3254 0.59 -0.1 3,409,101 + HP15_3254 0.59 -1.7 3,409,109 - HP15_3254 0.63 -0.3
Or see this region's nucleotide sequence