Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3092 and HP15_3093 overlap by 32 nucleotides HP15_3093 and HP15_3094 overlap by 4 nucleotides
HP15_3092: HP15_3092 - conserved hypothetical protein, at 3,247,622 to 3,248,755
_3092
HP15_3093: HP15_3093 - phage integrase family protein, at 3,248,724 to 3,249,707
_3093
HP15_3094: HP15_3094 - hypothetical protein, at 3,249,704 to 3,250,969
_3094
Position (kb)
3248
3249
3250 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3247.729 kb on - strand at 3247.732 kb on - strand at 3247.739 kb on - strand, within HP15_3092 at 3247.744 kb on - strand, within HP15_3092 at 3247.764 kb on + strand, within HP15_3092 at 3247.777 kb on + strand, within HP15_3092 at 3247.804 kb on - strand, within HP15_3092 at 3247.841 kb on - strand, within HP15_3092 at 3247.849 kb on - strand, within HP15_3092 at 3248.051 kb on - strand, within HP15_3092 at 3248.070 kb on + strand, within HP15_3092 at 3248.083 kb on - strand, within HP15_3092 at 3248.153 kb on + strand, within HP15_3092 at 3248.347 kb on + strand, within HP15_3092 at 3248.347 kb on - strand, within HP15_3092 at 3248.366 kb on + strand, within HP15_3092 at 3248.420 kb on - strand, within HP15_3092 at 3248.735 kb on + strand at 3248.757 kb on - strand at 3248.902 kb on + strand, within HP15_3093 at 3248.909 kb on + strand, within HP15_3093 at 3249.003 kb on - strand, within HP15_3093 at 3249.005 kb on + strand, within HP15_3093 at 3249.033 kb on - strand, within HP15_3093 at 3249.033 kb on - strand, within HP15_3093 at 3249.094 kb on + strand, within HP15_3093 at 3249.112 kb on - strand, within HP15_3093 at 3249.127 kb on + strand, within HP15_3093 at 3249.160 kb on - strand, within HP15_3093 at 3249.214 kb on + strand, within HP15_3093 at 3249.247 kb on + strand, within HP15_3093 at 3249.314 kb on + strand, within HP15_3093 at 3249.558 kb on - strand, within HP15_3093 at 3249.756 kb on + strand at 3249.756 kb on + strand at 3249.756 kb on + strand at 3249.756 kb on + strand at 3249.764 kb on - strand at 3249.764 kb on - strand at 3249.764 kb on - strand at 3249.764 kb on - strand at 3249.848 kb on - strand, within HP15_3094 at 3249.856 kb on + strand, within HP15_3094 at 3249.907 kb on - strand, within HP15_3094 at 3249.958 kb on - strand, within HP15_3094 at 3250.203 kb on + strand, within HP15_3094 at 3250.318 kb on - strand, within HP15_3094 at 3250.370 kb on + strand, within HP15_3094 at 3250.422 kb on + strand, within HP15_3094 at 3250.449 kb on + strand, within HP15_3094 at 3250.454 kb on + strand, within HP15_3094 at 3250.475 kb on - strand, within HP15_3094 at 3250.485 kb on + strand, within HP15_3094 at 3250.493 kb on + strand, within HP15_3094 at 3250.520 kb on - strand, within HP15_3094 at 3250.520 kb on - strand, within HP15_3094 at 3250.542 kb on - strand, within HP15_3094 at 3250.554 kb on - strand, within HP15_3094 at 3250.655 kb on + strand, within HP15_3094
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,247,729 - +0.8 3,247,732 - -0.7 3,247,739 - HP15_3092 0.10 -2.8 3,247,744 - HP15_3092 0.11 -0.2 3,247,764 + HP15_3092 0.13 +1.2 3,247,777 + HP15_3092 0.14 +1.7 3,247,804 - HP15_3092 0.16 -0.4 3,247,841 - HP15_3092 0.19 -0.3 3,247,849 - HP15_3092 0.20 +1.1 3,248,051 - HP15_3092 0.38 +0.4 3,248,070 + HP15_3092 0.40 +0.4 3,248,083 - HP15_3092 0.41 +1.1 3,248,153 + HP15_3092 0.47 +1.9 3,248,347 + HP15_3092 0.64 +0.6 3,248,347 - HP15_3092 0.64 -1.4 3,248,366 + HP15_3092 0.66 +0.3 3,248,420 - HP15_3092 0.70 -1.8 3,248,735 + -0.3 3,248,757 - +1.1 3,248,902 + HP15_3093 0.18 -1.3 3,248,909 + HP15_3093 0.19 +0.3 3,249,003 - HP15_3093 0.28 +0.7 3,249,005 + HP15_3093 0.29 +0.1 3,249,033 - HP15_3093 0.31 -0.1 3,249,033 - HP15_3093 0.31 +0.1 3,249,094 + HP15_3093 0.38 +0.4 3,249,112 - HP15_3093 0.39 +0.4 3,249,127 + HP15_3093 0.41 +0.8 3,249,160 - HP15_3093 0.44 -0.4 3,249,214 + HP15_3093 0.50 +0.2 3,249,247 + HP15_3093 0.53 +0.4 3,249,314 + HP15_3093 0.60 +1.1 3,249,558 - HP15_3093 0.85 +0.8 3,249,756 + -0.6 3,249,756 + +0.1 3,249,756 + +0.5 3,249,756 + +0.2 3,249,764 - +0.7 3,249,764 - +0.3 3,249,764 - +0.2 3,249,764 - +0.1 3,249,848 - HP15_3094 0.11 +0.5 3,249,856 + HP15_3094 0.12 -0.3 3,249,907 - HP15_3094 0.16 -0.2 3,249,958 - HP15_3094 0.20 -0.7 3,250,203 + HP15_3094 0.39 -1.0 3,250,318 - HP15_3094 0.48 -0.2 3,250,370 + HP15_3094 0.53 -1.7 3,250,422 + HP15_3094 0.57 -1.5 3,250,449 + HP15_3094 0.59 +0.1 3,250,454 + HP15_3094 0.59 -0.5 3,250,475 - HP15_3094 0.61 +0.4 3,250,485 + HP15_3094 0.62 -1.1 3,250,493 + HP15_3094 0.62 -0.4 3,250,520 - HP15_3094 0.64 +0.5 3,250,520 - HP15_3094 0.64 +0.3 3,250,542 - HP15_3094 0.66 -2.5 3,250,554 - HP15_3094 0.67 -1.7 3,250,655 + HP15_3094 0.75 +0.8
Or see this region's nucleotide sequence