Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2968 and HP15_2969 overlap by 4 nucleotides HP15_2969 and HP15_2970 are separated by 85 nucleotides HP15_2970 and HP15_2971 overlap by 4 nucleotides
HP15_2968: HP15_2968 - deoxyribodipyrimidine photo-lyase, at 3,112,385 to 3,114,001
_2968
HP15_2969: HP15_2969 - transcriptional regulator, MerR family, at 3,113,998 to 3,114,501
_2969
HP15_2970: HP15_2970 - cation efflux protein, at 3,114,587 to 3,115,240
_2970
HP15_2971: HP15_2971 - auxin efflux carrier, at 3,115,237 to 3,116,154
_2971
Position (kb)
3113
3114
3115 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3113.353 kb on + strand, within HP15_2968 at 3113.402 kb on - strand, within HP15_2968 at 3113.446 kb on + strand, within HP15_2968 at 3113.562 kb on + strand, within HP15_2968 at 3113.617 kb on + strand, within HP15_2968 at 3113.625 kb on - strand, within HP15_2968 at 3113.674 kb on + strand, within HP15_2968 at 3113.705 kb on - strand, within HP15_2968 at 3113.939 kb on - strand at 3113.992 kb on + strand at 3114.010 kb on + strand at 3114.097 kb on - strand, within HP15_2969 at 3114.214 kb on - strand, within HP15_2969 at 3114.276 kb on - strand, within HP15_2969 at 3114.280 kb on + strand, within HP15_2969 at 3114.392 kb on - strand, within HP15_2969 at 3114.479 kb on + strand at 3114.490 kb on + strand at 3114.490 kb on + strand at 3114.498 kb on - strand at 3114.613 kb on + strand at 3114.644 kb on + strand at 3114.645 kb on - strand at 3114.652 kb on - strand at 3114.663 kb on + strand, within HP15_2970 at 3114.663 kb on + strand, within HP15_2970 at 3114.663 kb on + strand, within HP15_2970 at 3114.663 kb on + strand, within HP15_2970 at 3114.765 kb on + strand, within HP15_2970 at 3114.826 kb on + strand, within HP15_2970 at 3114.833 kb on + strand, within HP15_2970 at 3114.834 kb on - strand, within HP15_2970 at 3114.834 kb on - strand, within HP15_2970 at 3114.862 kb on + strand, within HP15_2970 at 3114.863 kb on - strand, within HP15_2970 at 3114.868 kb on + strand, within HP15_2970 at 3114.882 kb on + strand, within HP15_2970 at 3114.962 kb on - strand, within HP15_2970 at 3115.013 kb on + strand, within HP15_2970 at 3115.078 kb on + strand, within HP15_2970 at 3115.184 kb on + strand at 3115.192 kb on - strand at 3115.294 kb on - strand at 3115.333 kb on - strand, within HP15_2971 at 3115.335 kb on - strand, within HP15_2971 at 3115.355 kb on - strand, within HP15_2971 at 3115.406 kb on + strand, within HP15_2971 at 3115.406 kb on + strand, within HP15_2971 at 3115.425 kb on - strand, within HP15_2971 at 3115.447 kb on - strand, within HP15_2971 at 3115.463 kb on + strand, within HP15_2971 at 3115.466 kb on - strand, within HP15_2971
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,113,353 + HP15_2968 0.60 +0.7 3,113,402 - HP15_2968 0.63 -0.4 3,113,446 + HP15_2968 0.66 -1.9 3,113,562 + HP15_2968 0.73 +1.4 3,113,617 + HP15_2968 0.76 -0.5 3,113,625 - HP15_2968 0.77 +0.4 3,113,674 + HP15_2968 0.80 +0.8 3,113,705 - HP15_2968 0.82 +2.6 3,113,939 - +0.9 3,113,992 + -1.8 3,114,010 + +0.7 3,114,097 - HP15_2969 0.20 -2.0 3,114,214 - HP15_2969 0.43 -0.1 3,114,276 - HP15_2969 0.55 -1.2 3,114,280 + HP15_2969 0.56 -1.6 3,114,392 - HP15_2969 0.78 -0.6 3,114,479 + +1.0 3,114,490 + -0.2 3,114,490 + -0.3 3,114,498 - -2.0 3,114,613 + -1.3 3,114,644 + -0.1 3,114,645 - -0.6 3,114,652 - +0.2 3,114,663 + HP15_2970 0.12 -2.4 3,114,663 + HP15_2970 0.12 -1.7 3,114,663 + HP15_2970 0.12 +0.6 3,114,663 + HP15_2970 0.12 -0.3 3,114,765 + HP15_2970 0.27 -0.6 3,114,826 + HP15_2970 0.37 +0.1 3,114,833 + HP15_2970 0.38 -0.3 3,114,834 - HP15_2970 0.38 -1.8 3,114,834 - HP15_2970 0.38 -0.6 3,114,862 + HP15_2970 0.42 +1.2 3,114,863 - HP15_2970 0.42 +0.6 3,114,868 + HP15_2970 0.43 +1.3 3,114,882 + HP15_2970 0.45 -2.4 3,114,962 - HP15_2970 0.57 -0.7 3,115,013 + HP15_2970 0.65 -0.6 3,115,078 + HP15_2970 0.75 -1.8 3,115,184 + -0.2 3,115,192 - -1.5 3,115,294 - -1.7 3,115,333 - HP15_2971 0.10 +1.1 3,115,335 - HP15_2971 0.11 -3.2 3,115,355 - HP15_2971 0.13 +1.4 3,115,406 + HP15_2971 0.18 -0.4 3,115,406 + HP15_2971 0.18 +0.0 3,115,425 - HP15_2971 0.20 -0.5 3,115,447 - HP15_2971 0.23 -1.3 3,115,463 + HP15_2971 0.25 -2.4 3,115,466 - HP15_2971 0.25 -0.7
Or see this region's nucleotide sequence