Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2965 and HP15_2966 overlap by 4 nucleotides HP15_2966 and HP15_2967 are separated by 158 nucleotides HP15_2967 and HP15_2968 are separated by 116 nucleotides
HP15_2965: HP15_2965 - inner membrane protein, at 3,109,850 to 3,110,689
_2965
HP15_2966: HP15_2966 - electron transport protein SCO1/SenC, at 3,110,686 to 3,111,279
_2966
HP15_2967: HP15_2967 - cation efflux family protein, at 3,111,438 to 3,112,268
_2967
HP15_2968: HP15_2968 - deoxyribodipyrimidine photo-lyase, at 3,112,385 to 3,114,001
_2968
Position (kb)
3111
3112
3113 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3110.458 kb on - strand, within HP15_2965 at 3110.521 kb on - strand, within HP15_2965 at 3110.530 kb on + strand, within HP15_2965 at 3110.585 kb on - strand, within HP15_2965 at 3110.777 kb on + strand, within HP15_2966 at 3110.829 kb on - strand, within HP15_2966 at 3110.891 kb on + strand, within HP15_2966 at 3110.899 kb on - strand, within HP15_2966 at 3110.954 kb on - strand, within HP15_2966 at 3110.987 kb on + strand, within HP15_2966 at 3110.987 kb on + strand, within HP15_2966 at 3111.002 kb on + strand, within HP15_2966 at 3111.165 kb on - strand, within HP15_2966 at 3111.227 kb on + strand at 3111.242 kb on + strand at 3111.242 kb on + strand at 3111.247 kb on + strand at 3111.389 kb on - strand at 3111.434 kb on - strand at 3111.468 kb on - strand at 3111.483 kb on - strand at 3111.488 kb on - strand at 3111.517 kb on + strand at 3111.517 kb on + strand at 3111.517 kb on + strand at 3111.517 kb on + strand at 3111.534 kb on + strand, within HP15_2967 at 3111.546 kb on + strand, within HP15_2967 at 3111.546 kb on + strand, within HP15_2967 at 3111.559 kb on - strand, within HP15_2967 at 3111.585 kb on - strand, within HP15_2967 at 3111.599 kb on + strand, within HP15_2967 at 3111.633 kb on + strand, within HP15_2967 at 3111.678 kb on + strand, within HP15_2967 at 3111.777 kb on + strand, within HP15_2967 at 3111.795 kb on + strand, within HP15_2967 at 3111.857 kb on + strand, within HP15_2967 at 3111.909 kb on - strand, within HP15_2967 at 3111.909 kb on - strand, within HP15_2967 at 3111.988 kb on + strand, within HP15_2967 at 3111.996 kb on - strand, within HP15_2967 at 3112.068 kb on - strand, within HP15_2967 at 3112.087 kb on + strand, within HP15_2967 at 3112.105 kb on - strand, within HP15_2967 at 3112.138 kb on - strand, within HP15_2967 at 3112.143 kb on - strand, within HP15_2967 at 3112.143 kb on - strand, within HP15_2967 at 3112.270 kb on - strand at 3112.313 kb on + strand at 3112.473 kb on + strand at 3112.649 kb on - strand, within HP15_2968 at 3112.726 kb on - strand, within HP15_2968 at 3112.849 kb on + strand, within HP15_2968 at 3112.883 kb on + strand, within HP15_2968 at 3112.883 kb on + strand, within HP15_2968 at 3112.891 kb on - strand, within HP15_2968 at 3112.894 kb on + strand, within HP15_2968 at 3112.902 kb on - strand, within HP15_2968 at 3112.960 kb on + strand, within HP15_2968 at 3112.996 kb on - strand, within HP15_2968
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 3,110,458 - HP15_2965 0.72 -1.5 3,110,521 - HP15_2965 0.80 +1.3 3,110,530 + HP15_2965 0.81 +1.0 3,110,585 - HP15_2965 0.88 +0.5 3,110,777 + HP15_2966 0.15 +0.6 3,110,829 - HP15_2966 0.24 -0.3 3,110,891 + HP15_2966 0.35 -0.1 3,110,899 - HP15_2966 0.36 -0.0 3,110,954 - HP15_2966 0.45 +0.1 3,110,987 + HP15_2966 0.51 +0.3 3,110,987 + HP15_2966 0.51 +0.7 3,111,002 + HP15_2966 0.53 -0.5 3,111,165 - HP15_2966 0.81 +0.2 3,111,227 + +0.3 3,111,242 + +0.8 3,111,242 + +0.7 3,111,247 + +0.5 3,111,389 - +1.9 3,111,434 - -0.3 3,111,468 - -0.3 3,111,483 - +1.6 3,111,488 - +0.2 3,111,517 + -0.7 3,111,517 + -1.4 3,111,517 + +0.2 3,111,517 + +0.0 3,111,534 + HP15_2967 0.12 +0.2 3,111,546 + HP15_2967 0.13 -0.3 3,111,546 + HP15_2967 0.13 -1.7 3,111,559 - HP15_2967 0.15 -1.8 3,111,585 - HP15_2967 0.18 -0.2 3,111,599 + HP15_2967 0.19 -0.1 3,111,633 + HP15_2967 0.23 -2.0 3,111,678 + HP15_2967 0.29 -0.8 3,111,777 + HP15_2967 0.41 +0.0 3,111,795 + HP15_2967 0.43 -0.5 3,111,857 + HP15_2967 0.50 -0.5 3,111,909 - HP15_2967 0.57 -1.7 3,111,909 - HP15_2967 0.57 -0.2 3,111,988 + HP15_2967 0.66 -1.5 3,111,996 - HP15_2967 0.67 -2.3 3,112,068 - HP15_2967 0.76 -1.3 3,112,087 + HP15_2967 0.78 -0.3 3,112,105 - HP15_2967 0.80 -0.0 3,112,138 - HP15_2967 0.84 +0.4 3,112,143 - HP15_2967 0.85 -0.2 3,112,143 - HP15_2967 0.85 -1.6 3,112,270 - -1.0 3,112,313 + +0.6 3,112,473 + +0.6 3,112,649 - HP15_2968 0.16 +0.5 3,112,726 - HP15_2968 0.21 +1.5 3,112,849 + HP15_2968 0.29 +0.9 3,112,883 + HP15_2968 0.31 +1.6 3,112,883 + HP15_2968 0.31 +0.8 3,112,891 - HP15_2968 0.31 +0.2 3,112,894 + HP15_2968 0.31 +1.2 3,112,902 - HP15_2968 0.32 +0.2 3,112,960 + HP15_2968 0.36 +1.0 3,112,996 - HP15_2968 0.38 -0.1
Or see this region's nucleotide sequence