Strain Fitness in Marinobacter adhaerens HP15 around HP15_2199

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2197 and HP15_2198 are separated by 33 nucleotidesHP15_2198 and HP15_2199 are separated by 68 nucleotidesHP15_2199 and HP15_2200 are separated by 159 nucleotides HP15_2197: HP15_2197 - conserved hypothetical protein, secreted, at 2,314,623 to 2,315,510 _2197 HP15_2198: HP15_2198 - thioesterase superfamily protein, at 2,315,544 to 2,315,936 _2198 HP15_2199: HP15_2199 - glucose/sorbosone dehydrogenase, at 2,316,005 to 2,317,540 _2199 HP15_2200: HP15_2200 - oxidoreductase FAD/NAD(P)-binding domain protein, at 2,317,700 to 2,318,470 _2200 Position (kb) 2316 2317 2318Strain fitness (log2 ratio) -2 -1 0 1 2at 2315.366 kb on - strand, within HP15_2197at 2315.508 kb on + strandat 2315.748 kb on + strand, within HP15_2198at 2315.796 kb on + strand, within HP15_2198at 2315.839 kb on + strand, within HP15_2198at 2315.839 kb on + strand, within HP15_2198at 2315.847 kb on - strand, within HP15_2198at 2315.847 kb on - strand, within HP15_2198at 2315.966 kb on + strandat 2315.989 kb on - strandat 2316.280 kb on + strand, within HP15_2199at 2316.328 kb on + strand, within HP15_2199at 2316.527 kb on + strand, within HP15_2199at 2316.750 kb on - strand, within HP15_2199at 2316.828 kb on + strand, within HP15_2199at 2316.845 kb on + strand, within HP15_2199at 2316.863 kb on - strand, within HP15_2199at 2316.916 kb on + strand, within HP15_2199at 2317.005 kb on - strand, within HP15_2199at 2317.026 kb on + strand, within HP15_2199at 2317.041 kb on + strand, within HP15_2199at 2317.041 kb on + strand, within HP15_2199at 2317.059 kb on - strand, within HP15_2199at 2317.107 kb on + strand, within HP15_2199at 2317.214 kb on - strand, within HP15_2199at 2317.256 kb on + strand, within HP15_2199at 2317.392 kb on + strandat 2317.472 kb on - strandat 2317.511 kb on + strandat 2317.516 kb on + strandat 2317.627 kb on - strandat 2317.664 kb on - strandat 2317.793 kb on - strand, within HP15_2200at 2318.260 kb on - strand, within HP15_2200at 2318.328 kb on + strand, within HP15_2200at 2318.400 kb on + strandat 2318.414 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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2,315,366 - HP15_2197 0.84 -1.3
2,315,508 + -1.6
2,315,748 + HP15_2198 0.52 +0.6
2,315,796 + HP15_2198 0.64 +0.8
2,315,839 + HP15_2198 0.75 +0.4
2,315,839 + HP15_2198 0.75 -1.0
2,315,847 - HP15_2198 0.77 +0.7
2,315,847 - HP15_2198 0.77 -0.9
2,315,966 + -2.3
2,315,989 - +0.3
2,316,280 + HP15_2199 0.18 +0.9
2,316,328 + HP15_2199 0.21 +0.8
2,316,527 + HP15_2199 0.34 -0.1
2,316,750 - HP15_2199 0.49 +0.1
2,316,828 + HP15_2199 0.54 -0.2
2,316,845 + HP15_2199 0.55 +0.3
2,316,863 - HP15_2199 0.56 +0.8
2,316,916 + HP15_2199 0.59 -1.5
2,317,005 - HP15_2199 0.65 -0.1
2,317,026 + HP15_2199 0.66 +0.6
2,317,041 + HP15_2199 0.67 -0.0
2,317,041 + HP15_2199 0.67 +0.5
2,317,059 - HP15_2199 0.69 +0.5
2,317,107 + HP15_2199 0.72 +0.5
2,317,214 - HP15_2199 0.79 +0.3
2,317,256 + HP15_2199 0.81 -0.7
2,317,392 + +0.0
2,317,472 - -0.4
2,317,511 + -0.6
2,317,516 + +1.0
2,317,627 - +2.1
2,317,664 - +0.1
2,317,793 - HP15_2200 0.12 +1.6
2,318,260 - HP15_2200 0.73 +0.5
2,318,328 + HP15_2200 0.81 +1.7
2,318,400 + +2.3
2,318,414 - +1.2

Or see this region's nucleotide sequence