Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2180 and HP15_2181 are separated by 112 nucleotides HP15_2181 and HP15_2182 are separated by 156 nucleotides HP15_2182 and HP15_2183 are separated by 238 nucleotides
HP15_2180: HP15_2180 - transcriptional regulator, RpiR family protein, at 2,291,896 to 2,292,789
_2180
HP15_2181: HP15_2181 - PpiC-type peptidyl-prolyl cis-trans isomerase, at 2,292,902 to 2,294,746
_2181
HP15_2182: HP15_2182 - histone-like bacterial DNA-binding protein, at 2,294,903 to 2,295,175
_2182
HP15_2183: HP15_2183 - DNA-binding ATP-dependent protease La, at 2,295,414 to 2,297,831
_2183
Position (kb)
2292
2293
2294
2295 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2292.186 kb on - strand, within HP15_2180 at 2292.261 kb on + strand, within HP15_2180 at 2292.417 kb on + strand, within HP15_2180 at 2292.439 kb on - strand, within HP15_2180 at 2292.540 kb on + strand, within HP15_2180 at 2292.548 kb on - strand, within HP15_2180 at 2292.558 kb on + strand, within HP15_2180 at 2292.691 kb on + strand, within HP15_2180 at 2292.737 kb on + strand at 2292.759 kb on + strand at 2292.766 kb on - strand at 2292.802 kb on + strand at 2292.807 kb on + strand at 2292.869 kb on + strand at 2293.003 kb on + strand at 2293.025 kb on - strand at 2293.150 kb on + strand, within HP15_2181 at 2293.208 kb on + strand, within HP15_2181 at 2293.208 kb on + strand, within HP15_2181 at 2293.216 kb on - strand, within HP15_2181 at 2293.216 kb on - strand, within HP15_2181 at 2293.216 kb on - strand, within HP15_2181 at 2293.395 kb on + strand, within HP15_2181 at 2293.504 kb on + strand, within HP15_2181 at 2293.788 kb on + strand, within HP15_2181 at 2293.952 kb on - strand, within HP15_2181 at 2293.997 kb on - strand, within HP15_2181 at 2294.285 kb on + strand, within HP15_2181 at 2294.613 kb on + strand at 2294.628 kb on - strand at 2294.722 kb on - strand at 2294.764 kb on + strand at 2294.764 kb on + strand at 2294.779 kb on + strand at 2294.819 kb on - strand at 2295.519 kb on - strand at 2295.524 kb on - strand at 2295.536 kb on - strand at 2295.654 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,292,186 - HP15_2180 0.32 +1.3 2,292,261 + HP15_2180 0.41 +0.6 2,292,417 + HP15_2180 0.58 -0.1 2,292,439 - HP15_2180 0.61 -0.4 2,292,540 + HP15_2180 0.72 +0.6 2,292,548 - HP15_2180 0.73 +0.2 2,292,558 + HP15_2180 0.74 +2.0 2,292,691 + HP15_2180 0.89 +2.3 2,292,737 + +0.9 2,292,759 + -0.3 2,292,766 - +1.0 2,292,802 + -0.0 2,292,807 + +0.4 2,292,869 + +0.5 2,293,003 + -1.9 2,293,025 - -1.5 2,293,150 + HP15_2181 0.13 -1.3 2,293,208 + HP15_2181 0.17 -2.5 2,293,208 + HP15_2181 0.17 -1.4 2,293,216 - HP15_2181 0.17 -2.6 2,293,216 - HP15_2181 0.17 -2.3 2,293,216 - HP15_2181 0.17 -3.4 2,293,395 + HP15_2181 0.27 -2.9 2,293,504 + HP15_2181 0.33 -2.1 2,293,788 + HP15_2181 0.48 -3.0 2,293,952 - HP15_2181 0.57 -3.5 2,293,997 - HP15_2181 0.59 -0.3 2,294,285 + HP15_2181 0.75 -1.5 2,294,613 + -0.5 2,294,628 - -1.2 2,294,722 - -1.7 2,294,764 + -1.7 2,294,764 + -1.9 2,294,779 + -0.5 2,294,819 - -0.9 2,295,519 - +1.1 2,295,524 - +1.7 2,295,536 - +3.3 2,295,654 - +3.6
Or see this region's nucleotide sequence