Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2138 and HP15_2139 are separated by 15 nucleotides HP15_2139 and HP15_2140 are separated by 46 nucleotides HP15_2140 and HP15_2141 are separated by 34 nucleotides
HP15_2138: HP15_2138 - conserved hypothetical protein, secreted, at 2,238,996 to 2,239,301
_2138
HP15_2139: HP15_2139 - tetratricopeptide TPR_2 repeat protein, at 2,239,317 to 2,239,826
_2139
HP15_2140: HP15_2140 - tetratricopeptide TPR_2 repeat protein, at 2,239,873 to 2,242,716
_2140
HP15_2141: HP15_2141 - protein containing tetratricopeptide repeats, at 2,242,751 to 2,244,625
_2141
Position (kb)
2239
2240
2241
2242
2243 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2238.889 kb on - strand at 2238.891 kb on + strand at 2238.954 kb on - strand at 2238.956 kb on - strand at 2238.996 kb on + strand at 2239.001 kb on + strand at 2239.004 kb on - strand at 2239.006 kb on + strand at 2239.014 kb on - strand at 2239.435 kb on - strand, within HP15_2139 at 2239.508 kb on + strand, within HP15_2139 at 2239.582 kb on - strand, within HP15_2139 at 2239.735 kb on - strand, within HP15_2139 at 2239.761 kb on - strand, within HP15_2139 at 2239.789 kb on + strand at 2239.795 kb on + strand at 2239.795 kb on + strand at 2239.877 kb on - strand at 2239.993 kb on - strand at 2240.039 kb on - strand at 2240.129 kb on - strand at 2240.314 kb on - strand, within HP15_2140 at 2240.316 kb on + strand, within HP15_2140 at 2240.324 kb on - strand, within HP15_2140 at 2240.495 kb on - strand, within HP15_2140 at 2240.749 kb on + strand, within HP15_2140 at 2240.752 kb on - strand, within HP15_2140 at 2240.953 kb on + strand, within HP15_2140 at 2241.117 kb on + strand, within HP15_2140 at 2241.163 kb on - strand, within HP15_2140 at 2241.163 kb on - strand, within HP15_2140 at 2241.163 kb on - strand, within HP15_2140 at 2241.165 kb on - strand, within HP15_2140 at 2241.165 kb on - strand, within HP15_2140 at 2241.236 kb on - strand, within HP15_2140 at 2241.360 kb on - strand, within HP15_2140 at 2241.360 kb on - strand, within HP15_2140 at 2241.360 kb on - strand, within HP15_2140 at 2241.367 kb on + strand, within HP15_2140 at 2241.451 kb on - strand, within HP15_2140 at 2241.708 kb on + strand, within HP15_2140 at 2241.708 kb on + strand, within HP15_2140 at 2241.716 kb on - strand, within HP15_2140 at 2241.815 kb on + strand, within HP15_2140 at 2241.860 kb on - strand, within HP15_2140 at 2241.941 kb on - strand, within HP15_2140 at 2241.946 kb on - strand, within HP15_2140 at 2242.069 kb on - strand, within HP15_2140 at 2242.073 kb on + strand, within HP15_2140 at 2242.261 kb on + strand, within HP15_2140 at 2242.276 kb on - strand, within HP15_2140 at 2242.276 kb on - strand, within HP15_2140 at 2242.458 kb on + strand at 2242.466 kb on - strand at 2242.500 kb on - strand at 2242.524 kb on + strand at 2242.713 kb on - strand at 2242.720 kb on - strand at 2242.723 kb on + strand at 2242.915 kb on - strand at 2243.166 kb on - strand, within HP15_2141 at 2243.372 kb on - strand, within HP15_2141 at 2243.413 kb on + strand, within HP15_2141 at 2243.423 kb on + strand, within HP15_2141 at 2243.691 kb on + strand, within HP15_2141
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,238,889 - +0.7 2,238,891 + +0.5 2,238,954 - +0.7 2,238,956 - -0.9 2,238,996 + +0.5 2,239,001 + +0.5 2,239,004 - +0.1 2,239,006 + +0.2 2,239,014 - +0.6 2,239,435 - HP15_2139 0.23 +0.6 2,239,508 + HP15_2139 0.37 +0.7 2,239,582 - HP15_2139 0.52 +1.9 2,239,735 - HP15_2139 0.82 +0.3 2,239,761 - HP15_2139 0.87 +0.1 2,239,789 + -1.1 2,239,795 + +0.7 2,239,795 + +0.3 2,239,877 - -1.5 2,239,993 - +0.2 2,240,039 - -1.8 2,240,129 - +0.5 2,240,314 - HP15_2140 0.16 +0.6 2,240,316 + HP15_2140 0.16 +0.3 2,240,324 - HP15_2140 0.16 +1.0 2,240,495 - HP15_2140 0.22 +1.5 2,240,749 + HP15_2140 0.31 -0.8 2,240,752 - HP15_2140 0.31 -0.7 2,240,953 + HP15_2140 0.38 +2.5 2,241,117 + HP15_2140 0.44 +1.1 2,241,163 - HP15_2140 0.45 +0.7 2,241,163 - HP15_2140 0.45 +0.6 2,241,163 - HP15_2140 0.45 -0.5 2,241,165 - HP15_2140 0.45 -2.0 2,241,165 - HP15_2140 0.45 +0.3 2,241,236 - HP15_2140 0.48 +0.6 2,241,360 - HP15_2140 0.52 -0.7 2,241,360 - HP15_2140 0.52 +1.6 2,241,360 - HP15_2140 0.52 +1.4 2,241,367 + HP15_2140 0.53 +0.3 2,241,451 - HP15_2140 0.55 -0.4 2,241,708 + HP15_2140 0.65 -0.3 2,241,708 + HP15_2140 0.65 +0.1 2,241,716 - HP15_2140 0.65 +0.6 2,241,815 + HP15_2140 0.68 -1.0 2,241,860 - HP15_2140 0.70 +1.9 2,241,941 - HP15_2140 0.73 +0.4 2,241,946 - HP15_2140 0.73 +0.2 2,242,069 - HP15_2140 0.77 -0.9 2,242,073 + HP15_2140 0.77 +0.4 2,242,261 + HP15_2140 0.84 -1.4 2,242,276 - HP15_2140 0.84 +0.1 2,242,276 - HP15_2140 0.84 +0.2 2,242,458 + +1.0 2,242,466 - +0.7 2,242,500 - +0.9 2,242,524 + +0.2 2,242,713 - +0.3 2,242,720 - -1.6 2,242,723 + +0.9 2,242,915 - +1.6 2,243,166 - HP15_2141 0.22 -0.3 2,243,372 - HP15_2141 0.33 -2.2 2,243,413 + HP15_2141 0.35 +0.2 2,243,423 + HP15_2141 0.36 +0.5 2,243,691 + HP15_2141 0.50 +0.3
Or see this region's nucleotide sequence