Strain Fitness in Marinobacter adhaerens HP15 around HP15_1749

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1748 and HP15_1749 overlap by 8 nucleotidesHP15_1749 and HP15_1750 overlap by 4 nucleotides HP15_1748: HP15_1748 - cysteine/glutathione ABC transporter membrane/ATP-binding component, at 1,846,770 to 1,848,482 _1748 HP15_1749: HP15_1749 - transport ATP-binding protein CydC, at 1,848,475 to 1,850,091 _1749 HP15_1750: HP15_1750 - saccharopine dehydrogenase-like protein, at 1,850,088 to 1,851,329 _1750 Position (kb) 1848 1849 1850 1851Strain fitness (log2 ratio) -2 -1 0 1 2at 1847.635 kb on + strand, within HP15_1748at 1847.643 kb on - strand, within HP15_1748at 1847.646 kb on + strand, within HP15_1748at 1847.809 kb on + strand, within HP15_1748at 1847.817 kb on - strand, within HP15_1748at 1847.817 kb on - strand, within HP15_1748at 1848.026 kb on - strand, within HP15_1748at 1848.069 kb on + strand, within HP15_1748at 1848.169 kb on - strand, within HP15_1748at 1848.201 kb on - strand, within HP15_1748at 1848.239 kb on - strand, within HP15_1748at 1848.388 kb on + strandat 1848.401 kb on - strandat 1848.467 kb on + strandat 1848.475 kb on - strandat 1848.627 kb on + strandat 1848.707 kb on - strand, within HP15_1749at 1848.717 kb on - strand, within HP15_1749at 1848.717 kb on - strand, within HP15_1749at 1848.823 kb on - strand, within HP15_1749at 1848.833 kb on - strand, within HP15_1749at 1848.918 kb on - strand, within HP15_1749at 1849.035 kb on + strand, within HP15_1749at 1849.035 kb on + strand, within HP15_1749at 1849.123 kb on + strand, within HP15_1749at 1849.185 kb on + strand, within HP15_1749at 1849.193 kb on - strand, within HP15_1749at 1849.233 kb on + strand, within HP15_1749at 1849.234 kb on + strand, within HP15_1749at 1849.294 kb on - strand, within HP15_1749at 1849.304 kb on - strand, within HP15_1749at 1849.365 kb on + strand, within HP15_1749at 1849.365 kb on + strand, within HP15_1749at 1849.365 kb on + strand, within HP15_1749at 1849.373 kb on - strand, within HP15_1749at 1849.565 kb on - strand, within HP15_1749at 1849.565 kb on - strand, within HP15_1749at 1849.688 kb on + strand, within HP15_1749at 1849.696 kb on - strand, within HP15_1749at 1849.826 kb on + strand, within HP15_1749at 1849.830 kb on - strand, within HP15_1749at 1849.935 kb on - strandat 1849.947 kb on + strandat 1850.173 kb on + strandat 1850.181 kb on - strandat 1850.181 kb on - strandat 1850.181 kb on - strandat 1850.187 kb on + strandat 1850.190 kb on - strandat 1850.525 kb on - strand, within HP15_1750at 1850.559 kb on - strand, within HP15_1750at 1850.570 kb on + strand, within HP15_1750at 1850.600 kb on - strand, within HP15_1750at 1850.608 kb on - strand, within HP15_1750at 1850.794 kb on + strand, within HP15_1750at 1850.926 kb on - strand, within HP15_1750at 1850.995 kb on - strand, within HP15_1750at 1851.001 kb on + strand, within HP15_1750at 1851.019 kb on - strand, within HP15_1750at 1851.027 kb on - strand, within HP15_1750at 1851.086 kb on - strand, within HP15_1750

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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1,847,635 + HP15_1748 0.50 +2.0
1,847,643 - HP15_1748 0.51 +0.5
1,847,646 + HP15_1748 0.51 -1.4
1,847,809 + HP15_1748 0.61 +1.0
1,847,817 - HP15_1748 0.61 -0.2
1,847,817 - HP15_1748 0.61 +1.1
1,848,026 - HP15_1748 0.73 +1.8
1,848,069 + HP15_1748 0.76 +0.5
1,848,169 - HP15_1748 0.82 +0.9
1,848,201 - HP15_1748 0.84 +0.0
1,848,239 - HP15_1748 0.86 -0.9
1,848,388 + -1.0
1,848,401 - -1.2
1,848,467 + +0.4
1,848,475 - +0.9
1,848,627 + +0.7
1,848,707 - HP15_1749 0.14 -0.3
1,848,717 - HP15_1749 0.15 +1.2
1,848,717 - HP15_1749 0.15 +0.2
1,848,823 - HP15_1749 0.22 +0.5
1,848,833 - HP15_1749 0.22 +1.1
1,848,918 - HP15_1749 0.27 -1.0
1,849,035 + HP15_1749 0.35 +1.2
1,849,035 + HP15_1749 0.35 -0.6
1,849,123 + HP15_1749 0.40 +0.7
1,849,185 + HP15_1749 0.44 -1.1
1,849,193 - HP15_1749 0.44 +0.3
1,849,233 + HP15_1749 0.47 +1.3
1,849,234 + HP15_1749 0.47 +1.6
1,849,294 - HP15_1749 0.51 +1.2
1,849,304 - HP15_1749 0.51 +1.0
1,849,365 + HP15_1749 0.55 +0.2
1,849,365 + HP15_1749 0.55 +1.5
1,849,365 + HP15_1749 0.55 +0.8
1,849,373 - HP15_1749 0.56 -0.2
1,849,565 - HP15_1749 0.67 +1.1
1,849,565 - HP15_1749 0.67 +1.0
1,849,688 + HP15_1749 0.75 +0.2
1,849,696 - HP15_1749 0.76 +0.6
1,849,826 + HP15_1749 0.84 -1.3
1,849,830 - HP15_1749 0.84 +0.6
1,849,935 - +0.9
1,849,947 + +0.5
1,850,173 + -0.7
1,850,181 - -0.9
1,850,181 - -0.7
1,850,181 - -0.5
1,850,187 + +0.2
1,850,190 - -0.6
1,850,525 - HP15_1750 0.35 -0.0
1,850,559 - HP15_1750 0.38 +0.9
1,850,570 + HP15_1750 0.39 +0.4
1,850,600 - HP15_1750 0.41 +0.4
1,850,608 - HP15_1750 0.42 -0.1
1,850,794 + HP15_1750 0.57 +0.3
1,850,926 - HP15_1750 0.67 -1.8
1,850,995 - HP15_1750 0.73 -0.1
1,851,001 + HP15_1750 0.74 +0.1
1,851,019 - HP15_1750 0.75 +0.9
1,851,027 - HP15_1750 0.76 -0.1
1,851,086 - HP15_1750 0.80 -1.9

Or see this region's nucleotide sequence