Strain Fitness in Marinobacter adhaerens HP15 around HP15_1537

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1535 and HP15_1536 overlap by 4 nucleotidesHP15_1536 and HP15_1537 overlap by 2 nucleotidesHP15_1537 and HP15_1538 are separated by 23 nucleotides HP15_1535: HP15_1535 - NAD-dependent DNA ligase, at 1,619,194 to 1,621,230 _1535 HP15_1536: HP15_1536 - hypothetical protein, at 1,621,227 to 1,621,376 _1536 HP15_1537: HP15_1537 - conserved hypothetical protein, at 1,621,375 to 1,622,631 _1537 HP15_1538: HP15_1538 - conserved hypothetical protein, at 1,622,655 to 1,624,124 _1538 Position (kb) 1621 1622 1623Strain fitness (log2 ratio) -2 -1 0 1at 1621.284 kb on - strand, within HP15_1536at 1621.542 kb on + strand, within HP15_1537at 1621.665 kb on - strand, within HP15_1537at 1621.756 kb on - strand, within HP15_1537at 1621.825 kb on + strand, within HP15_1537at 1622.077 kb on + strand, within HP15_1537at 1622.077 kb on + strand, within HP15_1537at 1622.156 kb on + strand, within HP15_1537at 1622.193 kb on + strand, within HP15_1537at 1622.193 kb on + strand, within HP15_1537at 1622.193 kb on + strand, within HP15_1537at 1622.249 kb on + strand, within HP15_1537at 1622.257 kb on - strand, within HP15_1537at 1622.293 kb on + strand, within HP15_1537at 1622.301 kb on - strand, within HP15_1537at 1622.311 kb on - strand, within HP15_1537at 1622.320 kb on - strand, within HP15_1537at 1622.392 kb on - strand, within HP15_1537at 1622.472 kb on + strand, within HP15_1537at 1622.493 kb on + strand, within HP15_1537at 1622.555 kb on + strandat 1622.701 kb on - strandat 1622.713 kb on + strandat 1622.749 kb on - strandat 1622.768 kb on - strandat 1622.921 kb on - strand, within HP15_1538at 1622.967 kb on - strand, within HP15_1538at 1622.973 kb on + strand, within HP15_1538at 1622.981 kb on - strand, within HP15_1538at 1623.157 kb on + strand, within HP15_1538at 1623.212 kb on - strand, within HP15_1538

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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1,621,284 - HP15_1536 0.38 +0.3
1,621,542 + HP15_1537 0.13 +0.7
1,621,665 - HP15_1537 0.23 +1.0
1,621,756 - HP15_1537 0.30 -0.9
1,621,825 + HP15_1537 0.36 +0.3
1,622,077 + HP15_1537 0.56 -2.5
1,622,077 + HP15_1537 0.56 +0.7
1,622,156 + HP15_1537 0.62 +1.2
1,622,193 + HP15_1537 0.65 +0.3
1,622,193 + HP15_1537 0.65 +0.4
1,622,193 + HP15_1537 0.65 -2.3
1,622,249 + HP15_1537 0.70 -1.5
1,622,257 - HP15_1537 0.70 -0.5
1,622,293 + HP15_1537 0.73 +0.4
1,622,301 - HP15_1537 0.74 -0.2
1,622,311 - HP15_1537 0.74 +0.2
1,622,320 - HP15_1537 0.75 -0.3
1,622,392 - HP15_1537 0.81 -1.9
1,622,472 + HP15_1537 0.87 -1.7
1,622,493 + HP15_1537 0.89 +0.2
1,622,555 + +0.4
1,622,701 - +0.3
1,622,713 + -1.0
1,622,749 - +0.2
1,622,768 - -1.3
1,622,921 - HP15_1538 0.18 +1.7
1,622,967 - HP15_1538 0.21 +0.7
1,622,973 + HP15_1538 0.22 +0.2
1,622,981 - HP15_1538 0.22 -2.1
1,623,157 + HP15_1538 0.34 +0.3
1,623,212 - HP15_1538 0.38 -0.4

Or see this region's nucleotide sequence