Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1415 and HP15_1416 are separated by 635 nucleotides HP15_1416 and HP15_1417 are separated by 81 nucleotides HP15_1417 and HP15_1418 are separated by 22 nucleotides
HP15_1415: HP15_1415 - diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s), at 1,494,921 to 1,497,551
_1415
HP15_1416: HP15_1416 - L-carnitine dehydratase/bile acid-inducible protein F, at 1,498,187 to 1,499,392
_1416
HP15_1417: HP15_1417 - ABC transporter, ATP-binding protein, at 1,499,474 to 1,500,211
_1417
HP15_1418: HP15_1418 - membrane protein containing DUF214, permase predicted, at 1,500,234 to 1,502,768
_1418
Position (kb)
1498
1499
1500 Strain fitness (log2 ratio)
-2
-1
0
1 at 1497.242 kb on - strand, within HP15_1415 at 1497.242 kb on - strand, within HP15_1415 at 1497.294 kb on + strand at 1497.299 kb on + strand at 1497.304 kb on + strand at 1497.328 kb on + strand at 1497.414 kb on + strand at 1497.419 kb on + strand at 1497.422 kb on - strand at 1497.422 kb on - strand at 1497.427 kb on - strand at 1497.495 kb on - strand at 1497.521 kb on + strand at 1497.541 kb on - strand at 1497.567 kb on + strand at 1497.899 kb on + strand at 1498.029 kb on + strand at 1498.131 kb on + strand at 1498.316 kb on + strand, within HP15_1416 at 1498.374 kb on + strand, within HP15_1416 at 1498.382 kb on - strand, within HP15_1416 at 1498.463 kb on + strand, within HP15_1416 at 1498.575 kb on + strand, within HP15_1416 at 1498.646 kb on + strand, within HP15_1416 at 1498.792 kb on + strand, within HP15_1416 at 1498.846 kb on - strand, within HP15_1416 at 1498.937 kb on - strand, within HP15_1416 at 1499.084 kb on - strand, within HP15_1416 at 1499.216 kb on + strand, within HP15_1416 at 1499.502 kb on + strand at 1499.655 kb on + strand, within HP15_1417 at 1499.839 kb on + strand, within HP15_1417 at 1499.917 kb on + strand, within HP15_1417 at 1499.939 kb on - strand, within HP15_1417 at 1499.950 kb on + strand, within HP15_1417 at 1499.950 kb on + strand, within HP15_1417 at 1499.963 kb on - strand, within HP15_1417 at 1499.997 kb on - strand, within HP15_1417 at 1500.080 kb on + strand, within HP15_1417 at 1500.112 kb on + strand, within HP15_1417 at 1500.138 kb on + strand at 1500.146 kb on - strand at 1500.146 kb on - strand at 1500.146 kb on - strand at 1500.204 kb on - strand at 1500.217 kb on + strand at 1500.224 kb on - strand at 1500.315 kb on + strand at 1500.349 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,497,242 - HP15_1415 0.88 -0.2 1,497,242 - HP15_1415 0.88 -1.1 1,497,294 + +0.7 1,497,299 + +0.4 1,497,304 + +1.3 1,497,328 + +0.4 1,497,414 + +0.3 1,497,419 + -2.5 1,497,422 - -0.4 1,497,422 - +0.3 1,497,427 - -0.3 1,497,495 - -1.7 1,497,521 + +0.4 1,497,541 - -1.1 1,497,567 + +0.5 1,497,899 + +0.4 1,498,029 + +0.9 1,498,131 + -0.7 1,498,316 + HP15_1416 0.11 -0.1 1,498,374 + HP15_1416 0.16 +0.7 1,498,382 - HP15_1416 0.16 +0.3 1,498,463 + HP15_1416 0.23 +0.6 1,498,575 + HP15_1416 0.32 +0.2 1,498,646 + HP15_1416 0.38 +0.5 1,498,792 + HP15_1416 0.50 -0.7 1,498,846 - HP15_1416 0.55 -1.7 1,498,937 - HP15_1416 0.62 -0.8 1,499,084 - HP15_1416 0.74 +1.2 1,499,216 + HP15_1416 0.85 +0.5 1,499,502 + -0.0 1,499,655 + HP15_1417 0.25 -2.1 1,499,839 + HP15_1417 0.49 +0.1 1,499,917 + HP15_1417 0.60 -0.2 1,499,939 - HP15_1417 0.63 -0.9 1,499,950 + HP15_1417 0.64 -0.3 1,499,950 + HP15_1417 0.64 +0.1 1,499,963 - HP15_1417 0.66 -0.6 1,499,997 - HP15_1417 0.71 +0.1 1,500,080 + HP15_1417 0.82 -1.8 1,500,112 + HP15_1417 0.86 +0.2 1,500,138 + -0.6 1,500,146 - -0.1 1,500,146 - +0.7 1,500,146 - -1.1 1,500,204 - +0.1 1,500,217 + -0.9 1,500,224 - +0.0 1,500,315 + -1.2 1,500,349 - -1.0
Or see this region's nucleotide sequence