Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1255 and HP15_1256 are separated by 63 nucleotides HP15_1256 and HP15_1257 are separated by 80 nucleotides HP15_1257 and HP15_1258 are separated by 1 nucleotides HP15_1258 and HP15_1259 are separated by 52 nucleotides
HP15_1255: HP15_1255 - protein containing Smr protein/MutS2 C-terminal domain, at 1,315,784 to 1,316,365
_1255
HP15_1256: HP15_1256 - conserved hypothetical protein, at 1,316,429 to 1,316,620
_1256
HP15_1257: HP15_1257 - (2Fe-2S)-binding domain protein, at 1,316,701 to 1,317,186
_1257
HP15_1258: HP15_1258 - isoquinoline 1-oxidoreductase, beta subunit, at 1,317,188 to 1,319,392
_1258
HP15_1259: HP15_1259 - xanthine dehydrogenase accessory factor, at 1,319,445 to 1,320,380
_1259
Position (kb)
1317
1318
1319
1320 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1316.239 kb on + strand, within HP15_1255 at 1316.249 kb on + strand, within HP15_1255 at 1316.356 kb on - strand at 1316.360 kb on + strand at 1316.368 kb on - strand at 1316.513 kb on + strand, within HP15_1256 at 1316.560 kb on + strand, within HP15_1256 at 1316.581 kb on + strand, within HP15_1256 at 1316.627 kb on + strand at 1316.693 kb on + strand at 1316.837 kb on - strand, within HP15_1257 at 1316.876 kb on + strand, within HP15_1257 at 1317.015 kb on + strand, within HP15_1257 at 1317.018 kb on - strand, within HP15_1257 at 1317.222 kb on + strand at 1317.224 kb on + strand at 1317.296 kb on - strand at 1317.362 kb on + strand at 1317.363 kb on + strand at 1317.409 kb on - strand, within HP15_1258 at 1317.548 kb on - strand, within HP15_1258 at 1317.646 kb on - strand, within HP15_1258 at 1317.911 kb on + strand, within HP15_1258 at 1317.911 kb on + strand, within HP15_1258 at 1317.919 kb on - strand, within HP15_1258 at 1317.954 kb on - strand, within HP15_1258 at 1318.075 kb on - strand, within HP15_1258 at 1318.186 kb on + strand, within HP15_1258 at 1318.248 kb on + strand, within HP15_1258 at 1318.387 kb on - strand, within HP15_1258 at 1318.387 kb on - strand, within HP15_1258 at 1318.392 kb on - strand, within HP15_1258 at 1318.524 kb on - strand, within HP15_1258 at 1318.542 kb on - strand, within HP15_1258 at 1318.644 kb on - strand, within HP15_1258 at 1318.743 kb on + strand, within HP15_1258 at 1318.783 kb on - strand, within HP15_1258 at 1318.963 kb on + strand, within HP15_1258 at 1318.995 kb on + strand, within HP15_1258 at 1319.098 kb on + strand, within HP15_1258 at 1319.192 kb on - strand at 1319.321 kb on + strand at 1319.321 kb on + strand at 1319.326 kb on + strand at 1319.355 kb on - strand at 1319.441 kb on - strand at 1319.535 kb on - strand at 1319.584 kb on + strand, within HP15_1259 at 1319.621 kb on - strand, within HP15_1259 at 1319.621 kb on - strand, within HP15_1259 at 1319.687 kb on + strand, within HP15_1259 at 1319.687 kb on + strand, within HP15_1259 at 1319.743 kb on - strand, within HP15_1259 at 1319.983 kb on + strand, within HP15_1259 at 1320.085 kb on - strand, within HP15_1259 at 1320.112 kb on + strand, within HP15_1259 at 1320.112 kb on + strand, within HP15_1259 at 1320.141 kb on - strand, within HP15_1259 at 1320.158 kb on + strand, within HP15_1259 at 1320.158 kb on + strand, within HP15_1259 at 1320.361 kb on + strand at 1320.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,316,239 + HP15_1255 0.78 +0.4 1,316,249 + HP15_1255 0.80 +0.7 1,316,356 - +0.1 1,316,360 + -0.4 1,316,368 - -0.1 1,316,513 + HP15_1256 0.44 -1.3 1,316,560 + HP15_1256 0.68 -0.7 1,316,581 + HP15_1256 0.79 +0.1 1,316,627 + +0.6 1,316,693 + +0.3 1,316,837 - HP15_1257 0.28 +0.2 1,316,876 + HP15_1257 0.36 +0.9 1,317,015 + HP15_1257 0.65 +0.7 1,317,018 - HP15_1257 0.65 +0.4 1,317,222 + -1.2 1,317,224 + -0.2 1,317,296 - +0.1 1,317,362 + -1.3 1,317,363 + -1.4 1,317,409 - HP15_1258 0.10 -2.0 1,317,548 - HP15_1258 0.16 +0.2 1,317,646 - HP15_1258 0.21 -2.2 1,317,911 + HP15_1258 0.33 +0.3 1,317,911 + HP15_1258 0.33 -1.6 1,317,919 - HP15_1258 0.33 -2.0 1,317,954 - HP15_1258 0.35 -1.3 1,318,075 - HP15_1258 0.40 +1.2 1,318,186 + HP15_1258 0.45 -0.1 1,318,248 + HP15_1258 0.48 +0.7 1,318,387 - HP15_1258 0.54 -1.0 1,318,387 - HP15_1258 0.54 -0.0 1,318,392 - HP15_1258 0.55 -1.0 1,318,524 - HP15_1258 0.61 -0.5 1,318,542 - HP15_1258 0.61 +0.3 1,318,644 - HP15_1258 0.66 -0.1 1,318,743 + HP15_1258 0.71 +0.1 1,318,783 - HP15_1258 0.72 -2.2 1,318,963 + HP15_1258 0.80 +0.6 1,318,995 + HP15_1258 0.82 +0.3 1,319,098 + HP15_1258 0.87 -0.0 1,319,192 - -1.8 1,319,321 + -2.0 1,319,321 + +1.1 1,319,326 + +0.2 1,319,355 - -0.4 1,319,441 - +0.7 1,319,535 - +0.2 1,319,584 + HP15_1259 0.15 -0.2 1,319,621 - HP15_1259 0.19 -0.3 1,319,621 - HP15_1259 0.19 +0.6 1,319,687 + HP15_1259 0.26 -1.0 1,319,687 + HP15_1259 0.26 -1.6 1,319,743 - HP15_1259 0.32 -0.4 1,319,983 + HP15_1259 0.57 +2.0 1,320,085 - HP15_1259 0.68 +0.7 1,320,112 + HP15_1259 0.71 +0.3 1,320,112 + HP15_1259 0.71 +0.9 1,320,141 - HP15_1259 0.74 -2.1 1,320,158 + HP15_1259 0.76 -1.3 1,320,158 + HP15_1259 0.76 +0.7 1,320,361 + -1.8 1,320,369 - -0.5
Or see this region's nucleotide sequence