Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1236 and HP15_1237 are separated by 178 nucleotides HP15_1237 and HP15_1238 are separated by 19 nucleotides
HP15_1236: HP15_1236 - conserved hypothetical protein, at 1,285,897 to 1,288,026
_1236
HP15_1237: HP15_1237 - regulatory protein RecX-like protein, at 1,288,205 to 1,288,675
_1237
HP15_1238: HP15_1238 - transglycosylase, Slt family protein, at 1,288,695 to 1,290,215
_1238
Position (kb)
1288
1289 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1287.230 kb on + strand, within HP15_1236 at 1287.415 kb on - strand, within HP15_1236 at 1287.420 kb on + strand, within HP15_1236 at 1287.513 kb on + strand, within HP15_1236 at 1287.521 kb on - strand, within HP15_1236 at 1287.533 kb on + strand, within HP15_1236 at 1287.541 kb on - strand, within HP15_1236 at 1287.546 kb on - strand, within HP15_1236 at 1287.560 kb on + strand, within HP15_1236 at 1287.580 kb on - strand, within HP15_1236 at 1287.620 kb on - strand, within HP15_1236 at 1287.651 kb on + strand, within HP15_1236 at 1287.657 kb on + strand, within HP15_1236 at 1287.672 kb on + strand, within HP15_1236 at 1287.675 kb on - strand, within HP15_1236 at 1287.690 kb on - strand, within HP15_1236 at 1287.774 kb on - strand, within HP15_1236 at 1287.890 kb on + strand at 1287.891 kb on - strand at 1287.900 kb on + strand at 1287.900 kb on + strand at 1287.900 kb on + strand at 1287.974 kb on - strand at 1287.985 kb on - strand at 1288.021 kb on + strand at 1288.256 kb on + strand, within HP15_1237 at 1288.290 kb on + strand, within HP15_1237 at 1288.402 kb on + strand, within HP15_1237 at 1288.475 kb on + strand, within HP15_1237 at 1288.477 kb on + strand, within HP15_1237 at 1288.483 kb on - strand, within HP15_1237 at 1288.492 kb on - strand, within HP15_1237 at 1288.502 kb on - strand, within HP15_1237 at 1288.516 kb on + strand, within HP15_1237 at 1288.516 kb on + strand, within HP15_1237 at 1288.524 kb on - strand, within HP15_1237 at 1288.554 kb on + strand, within HP15_1237 at 1288.608 kb on - strand, within HP15_1237 at 1288.865 kb on + strand, within HP15_1238 at 1288.873 kb on - strand, within HP15_1238 at 1288.994 kb on + strand, within HP15_1238 at 1288.999 kb on + strand, within HP15_1238 at 1289.085 kb on - strand, within HP15_1238 at 1289.240 kb on - strand, within HP15_1238 at 1289.244 kb on - strand, within HP15_1238 at 1289.508 kb on - strand, within HP15_1238 at 1289.508 kb on - strand, within HP15_1238 at 1289.553 kb on + strand, within HP15_1238 at 1289.580 kb on - strand, within HP15_1238 at 1289.672 kb on + strand, within HP15_1238 at 1289.672 kb on + strand, within HP15_1238
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,287,230 + HP15_1236 0.63 +1.8 1,287,415 - HP15_1236 0.71 +0.4 1,287,420 + HP15_1236 0.72 -0.6 1,287,513 + HP15_1236 0.76 +1.2 1,287,521 - HP15_1236 0.76 -0.6 1,287,533 + HP15_1236 0.77 +2.9 1,287,541 - HP15_1236 0.77 +1.8 1,287,546 - HP15_1236 0.77 +1.6 1,287,560 + HP15_1236 0.78 +1.1 1,287,580 - HP15_1236 0.79 +0.2 1,287,620 - HP15_1236 0.81 +1.1 1,287,651 + HP15_1236 0.82 -0.0 1,287,657 + HP15_1236 0.83 +1.3 1,287,672 + HP15_1236 0.83 -0.2 1,287,675 - HP15_1236 0.83 +0.3 1,287,690 - HP15_1236 0.84 -0.4 1,287,774 - HP15_1236 0.88 -1.3 1,287,890 + +2.3 1,287,891 - -0.2 1,287,900 + +0.8 1,287,900 + -0.8 1,287,900 + +1.4 1,287,974 - -1.1 1,287,985 - +1.1 1,288,021 + +1.4 1,288,256 + HP15_1237 0.11 +0.3 1,288,290 + HP15_1237 0.18 +0.4 1,288,402 + HP15_1237 0.42 +0.5 1,288,475 + HP15_1237 0.57 -0.9 1,288,477 + HP15_1237 0.58 +0.1 1,288,483 - HP15_1237 0.59 +0.5 1,288,492 - HP15_1237 0.61 +0.6 1,288,502 - HP15_1237 0.63 +1.0 1,288,516 + HP15_1237 0.66 +0.0 1,288,516 + HP15_1237 0.66 +0.1 1,288,524 - HP15_1237 0.68 +0.3 1,288,554 + HP15_1237 0.74 -1.6 1,288,608 - HP15_1237 0.86 +0.2 1,288,865 + HP15_1238 0.11 -0.2 1,288,873 - HP15_1238 0.12 -0.4 1,288,994 + HP15_1238 0.20 +0.5 1,288,999 + HP15_1238 0.20 -0.2 1,289,085 - HP15_1238 0.26 +0.2 1,289,240 - HP15_1238 0.36 +1.4 1,289,244 - HP15_1238 0.36 -0.6 1,289,508 - HP15_1238 0.53 +0.5 1,289,508 - HP15_1238 0.53 +1.0 1,289,553 + HP15_1238 0.56 +0.4 1,289,580 - HP15_1238 0.58 +1.1 1,289,672 + HP15_1238 0.64 -1.7 1,289,672 + HP15_1238 0.64 +1.4
Or see this region's nucleotide sequence