Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1200 and HP15_1201 are separated by 997 nucleotides HP15_1201 and HP15_1202 are separated by 5 nucleotides
HP15_1200: HP15_1200 - conserved hypothetical protein, at 1,235,602 to 1,238,877
_1200
HP15_1201: HP15_1201 - conserved hypothetical protein, at 1,239,875 to 1,241,359
_1201
HP15_1202: HP15_1202 - large ATP-binding protein, at 1,241,365 to 1,243,338
_1202
Position (kb)
1239
1240
1241
1242 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1238.899 kb on + strand at 1238.907 kb on - strand at 1238.917 kb on - strand at 1239.063 kb on - strand at 1239.111 kb on - strand at 1239.113 kb on - strand at 1239.212 kb on + strand at 1239.238 kb on - strand at 1239.275 kb on - strand at 1239.335 kb on + strand at 1239.340 kb on + strand at 1239.512 kb on + strand at 1239.719 kb on - strand at 1239.853 kb on - strand at 1239.877 kb on + strand at 1239.914 kb on - strand at 1239.916 kb on + strand at 1239.941 kb on - strand at 1239.967 kb on - strand at 1240.302 kb on + strand, within HP15_1201 at 1240.367 kb on - strand, within HP15_1201 at 1240.367 kb on - strand, within HP15_1201 at 1240.369 kb on - strand, within HP15_1201 at 1240.371 kb on + strand, within HP15_1201 at 1240.407 kb on + strand, within HP15_1201 at 1240.462 kb on - strand, within HP15_1201 at 1240.462 kb on - strand, within HP15_1201 at 1240.462 kb on - strand, within HP15_1201 at 1240.486 kb on + strand, within HP15_1201 at 1240.486 kb on + strand, within HP15_1201 at 1240.486 kb on + strand, within HP15_1201 at 1240.486 kb on + strand, within HP15_1201 at 1240.492 kb on + strand, within HP15_1201 at 1240.547 kb on + strand, within HP15_1201 at 1240.613 kb on - strand, within HP15_1201 at 1240.623 kb on + strand, within HP15_1201 at 1240.650 kb on - strand, within HP15_1201 at 1240.665 kb on + strand, within HP15_1201 at 1240.673 kb on - strand, within HP15_1201 at 1240.673 kb on - strand, within HP15_1201 at 1240.673 kb on - strand, within HP15_1201 at 1240.673 kb on - strand, within HP15_1201 at 1240.675 kb on + strand, within HP15_1201 at 1240.733 kb on + strand, within HP15_1201 at 1240.734 kb on - strand, within HP15_1201 at 1241.057 kb on + strand, within HP15_1201 at 1241.109 kb on + strand, within HP15_1201 at 1241.141 kb on + strand, within HP15_1201 at 1241.163 kb on + strand, within HP15_1201 at 1241.171 kb on - strand, within HP15_1201 at 1241.171 kb on - strand, within HP15_1201 at 1241.171 kb on - strand, within HP15_1201 at 1241.201 kb on - strand, within HP15_1201 at 1241.250 kb on - strand at 1241.273 kb on + strand at 1241.399 kb on - strand at 1241.614 kb on + strand, within HP15_1202 at 1241.648 kb on + strand, within HP15_1202 at 1241.938 kb on - strand, within HP15_1202 at 1242.008 kb on + strand, within HP15_1202 at 1242.078 kb on - strand, within HP15_1202 at 1242.111 kb on + strand, within HP15_1202 at 1242.135 kb on + strand, within HP15_1202 at 1242.156 kb on - strand, within HP15_1202 at 1242.184 kb on + strand, within HP15_1202 at 1242.305 kb on - strand, within HP15_1202
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,238,899 + -1.8 1,238,907 - -1.4 1,238,917 - +0.2 1,239,063 - +0.1 1,239,111 - +0.1 1,239,113 - +0.4 1,239,212 + -1.7 1,239,238 - -2.0 1,239,275 - +0.5 1,239,335 + +0.4 1,239,340 + -1.5 1,239,512 + +0.6 1,239,719 - -1.5 1,239,853 - -0.8 1,239,877 + -0.3 1,239,914 - +0.4 1,239,916 + +0.4 1,239,941 - -3.2 1,239,967 - +0.2 1,240,302 + HP15_1201 0.29 -0.4 1,240,367 - HP15_1201 0.33 -1.5 1,240,367 - HP15_1201 0.33 +0.2 1,240,369 - HP15_1201 0.33 -0.2 1,240,371 + HP15_1201 0.33 -2.2 1,240,407 + HP15_1201 0.36 +1.1 1,240,462 - HP15_1201 0.40 +0.7 1,240,462 - HP15_1201 0.40 +0.2 1,240,462 - HP15_1201 0.40 -0.1 1,240,486 + HP15_1201 0.41 +0.2 1,240,486 + HP15_1201 0.41 -0.1 1,240,486 + HP15_1201 0.41 -0.6 1,240,486 + HP15_1201 0.41 -0.5 1,240,492 + HP15_1201 0.42 +0.5 1,240,547 + HP15_1201 0.45 -1.0 1,240,613 - HP15_1201 0.50 -0.8 1,240,623 + HP15_1201 0.50 +0.2 1,240,650 - HP15_1201 0.52 -1.1 1,240,665 + HP15_1201 0.53 -2.6 1,240,673 - HP15_1201 0.54 +0.1 1,240,673 - HP15_1201 0.54 -1.7 1,240,673 - HP15_1201 0.54 +0.4 1,240,673 - HP15_1201 0.54 -1.2 1,240,675 + HP15_1201 0.54 +1.5 1,240,733 + HP15_1201 0.58 +0.2 1,240,734 - HP15_1201 0.58 +0.2 1,241,057 + HP15_1201 0.80 +0.2 1,241,109 + HP15_1201 0.83 -1.7 1,241,141 + HP15_1201 0.85 +0.1 1,241,163 + HP15_1201 0.87 -0.1 1,241,171 - HP15_1201 0.87 -3.4 1,241,171 - HP15_1201 0.87 -0.4 1,241,171 - HP15_1201 0.87 -2.3 1,241,201 - HP15_1201 0.89 +0.2 1,241,250 - +0.8 1,241,273 + -1.0 1,241,399 - -0.5 1,241,614 + HP15_1202 0.13 +0.2 1,241,648 + HP15_1202 0.14 -1.2 1,241,938 - HP15_1202 0.29 -2.0 1,242,008 + HP15_1202 0.33 +0.8 1,242,078 - HP15_1202 0.36 -0.5 1,242,111 + HP15_1202 0.38 +0.1 1,242,135 + HP15_1202 0.39 +0.1 1,242,156 - HP15_1202 0.40 +0.4 1,242,184 + HP15_1202 0.41 -0.4 1,242,305 - HP15_1202 0.48 +1.5
Or see this region's nucleotide sequence