Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1061 and HP15_1062 are separated by 61 nucleotides HP15_1062 and HP15_1063 are separated by 165 nucleotides HP15_1063 and HP15_1064 overlap by 4 nucleotides
HP15_1061: HP15_1061 - diadenosine tetraphosphatase and related serine/threonine protein phosphatase, at 1,085,475 to 1,086,494
_1061
HP15_1062: HP15_1062 - rhomboid family protein, at 1,086,556 to 1,087,401
_1062
HP15_1063: HP15_1063 - protein containing DUF1315, at 1,087,567 to 1,087,857
_1063
HP15_1064: HP15_1064 - conserved hypothetical protein, at 1,087,854 to 1,088,693
_1064
Position (kb)
1086
1087
1088 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1085.596 kb on + strand, within HP15_1061 at 1085.670 kb on + strand, within HP15_1061 at 1085.670 kb on + strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.678 kb on - strand, within HP15_1061 at 1085.692 kb on + strand, within HP15_1061 at 1085.742 kb on + strand, within HP15_1061 at 1085.747 kb on + strand, within HP15_1061 at 1085.808 kb on + strand, within HP15_1061 at 1085.843 kb on + strand, within HP15_1061 at 1085.885 kb on + strand, within HP15_1061 at 1085.885 kb on + strand, within HP15_1061 at 1085.893 kb on - strand, within HP15_1061 at 1085.893 kb on - strand, within HP15_1061 at 1085.939 kb on - strand, within HP15_1061 at 1085.978 kb on + strand, within HP15_1061 at 1086.083 kb on - strand, within HP15_1061 at 1086.107 kb on - strand, within HP15_1061 at 1086.146 kb on + strand, within HP15_1061 at 1086.162 kb on + strand, within HP15_1061 at 1086.162 kb on + strand, within HP15_1061 at 1086.162 kb on + strand, within HP15_1061 at 1086.170 kb on - strand, within HP15_1061 at 1086.535 kb on + strand at 1086.574 kb on - strand at 1086.588 kb on - strand at 1086.610 kb on - strand at 1086.610 kb on - strand at 1086.739 kb on + strand, within HP15_1062 at 1086.747 kb on - strand, within HP15_1062 at 1086.820 kb on - strand, within HP15_1062 at 1086.840 kb on - strand, within HP15_1062 at 1086.974 kb on - strand, within HP15_1062 at 1087.161 kb on + strand, within HP15_1062 at 1087.277 kb on + strand, within HP15_1062 at 1087.332 kb on + strand at 1087.446 kb on + strand at 1087.808 kb on - strand, within HP15_1063 at 1087.851 kb on + strand at 1087.935 kb on - strand at 1088.184 kb on + strand, within HP15_1064
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,085,596 + HP15_1061 0.12 +0.7 1,085,670 + HP15_1061 0.19 +0.7 1,085,670 + HP15_1061 0.19 -0.2 1,085,678 - HP15_1061 0.20 +1.0 1,085,678 - HP15_1061 0.20 -0.3 1,085,678 - HP15_1061 0.20 -1.1 1,085,678 - HP15_1061 0.20 -1.6 1,085,678 - HP15_1061 0.20 -2.1 1,085,678 - HP15_1061 0.20 -0.0 1,085,692 + HP15_1061 0.21 -1.2 1,085,742 + HP15_1061 0.26 +0.4 1,085,747 + HP15_1061 0.27 -0.5 1,085,808 + HP15_1061 0.33 +0.0 1,085,843 + HP15_1061 0.36 -1.8 1,085,885 + HP15_1061 0.40 +0.2 1,085,885 + HP15_1061 0.40 -0.3 1,085,893 - HP15_1061 0.41 -0.3 1,085,893 - HP15_1061 0.41 +0.3 1,085,939 - HP15_1061 0.45 -0.3 1,085,978 + HP15_1061 0.49 +0.1 1,086,083 - HP15_1061 0.60 +0.3 1,086,107 - HP15_1061 0.62 +0.1 1,086,146 + HP15_1061 0.66 +0.4 1,086,162 + HP15_1061 0.67 -1.4 1,086,162 + HP15_1061 0.67 +0.5 1,086,162 + HP15_1061 0.67 +0.6 1,086,170 - HP15_1061 0.68 +0.0 1,086,535 + -0.6 1,086,574 - -3.7 1,086,588 - +0.1 1,086,610 - +0.6 1,086,610 - +0.8 1,086,739 + HP15_1062 0.22 -0.8 1,086,747 - HP15_1062 0.23 +1.3 1,086,820 - HP15_1062 0.31 -0.8 1,086,840 - HP15_1062 0.34 -1.9 1,086,974 - HP15_1062 0.49 -0.5 1,087,161 + HP15_1062 0.72 -0.7 1,087,277 + HP15_1062 0.85 -0.0 1,087,332 + -1.1 1,087,446 + +0.7 1,087,808 - HP15_1063 0.83 +0.3 1,087,851 + +0.0 1,087,935 - -2.3 1,088,184 + HP15_1064 0.39 +0.0
Or see this region's nucleotide sequence